WormBase Tree Display for Gene: WBGene00021205

WBGene00021205 SMap: S_parent: Sequence: Y17G9B
  Identity: Version: 1
    Name: Sequence_name: Y17G9B.8
      Molecular_name: Y17G9B.8
        Y17G9B.8.1
        CE44211
        Y17G9B.8.2
      Other_name: CELE_Y17G9B.8 Accession_evidence: NDB BX284604
      Public_name: Y17G9B.8
    DB_info: Database: AceView gene 4F522
        WormQTL gene WBGene00021205
        WormFlux gene WBGene00021205
        NDB locus_tag CELE_Y17G9B.8
        Panther gene CAEEL|WormBase=WBGene00021205|UniProtKB=Q9N576
          family PTHR21539
        NCBI gene 177246
        RefSeq protein NM_068234.7
        TREEFAM TREEFAM_ID TF314958
        TrEMBL UniProtAcc Q9N576
        UniProt_GCRP UniProtAcc Q9N576
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (26)
    RNASeq_FPKM (74)
    GO_annotation: 00095096
      00095097
      00095098
      00095099
      00125625
    Contained_in_operon: CEOP4673
    Ortholog: WBGene00024935 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062795 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00157442 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00128353 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140305 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226571 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8442 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4929 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13723 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13901 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7037 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20880 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14480 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17037 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7360 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9972 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00155.g5779 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y17G9B.8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold589.g5005 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold589.g5010 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00846.g16040 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16048 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014572 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06051 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40129600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10270 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239094 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00113056 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00302719 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000516 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      FB:FBgn0050390 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041010-62 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:25156 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1922815 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310609 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00020673 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable methylated histone binding activity. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Is an ortholog of human SGF29 (SAGA complex associated factor 29). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:8947 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25156)
  Molecular_info: Corresponding_CDS: Y17G9B.8
    Corresponding_CDS_history: Y17G9B.8:wp102
      Y17G9B.8:wp208
    Corresponding_transcript: Y17G9B.8.1
      Y17G9B.8.2
    Other_sequence (13)
    Associated_feature: WBsf651778
      WBsf651779
      WBsf996387
      WBsf230012
  Experimental_info: RNAi_result: WBRNAi00020094 Inferred_automatically: RNAi_primary
      WBRNAi00020093 Inferred_automatically: RNAi_primary
      WBRNAi00000538 Inferred_automatically: RNAi_primary
      WBRNAi00036688 Inferred_automatically: RNAi_primary
      WBRNAi00055602 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017268
      Expr1039246
      Expr1159109
      Expr2007122
      Expr2025350
    Drives_construct: WBCnstr00024627
    Construct_product: WBCnstr00024627
    Microarray_results (20)
    Expression_cluster (95)
  Map_info: Positive: Positive_clone: Y17G9B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 0.90064
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene