WormBase Tree Display for Gene: WBGene00020673
expand all nodes | collapse all nodes | view schema
| WBGene00020673 | SMap | S_parent | Sequence | T22B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T22B7.4 | |||||||
| Molecular_name | T22B7.4 | ||||||||
| T22B7.4.1 | |||||||||
| CE13946 | |||||||||
| Other_name | CELE_T22B7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T22B7.4 | ||||||||
| DB_info | Database | AceView | gene | XG258 | |||||
| WormQTL | gene | WBGene00020673 | |||||||
| WormFlux | gene | WBGene00020673 | |||||||
| NDB | locus_tag | CELE_T22B7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020673|UniProtKB=Q23039 | |||||||
| family | PTHR21539 | ||||||||
| NCBI | gene | 180831 | |||||||
| RefSeq | protein | NM_076548.7 | |||||||
| TREEFAM | TREEFAM_ID | TF314958 | |||||||
| TrEMBL | UniProtAcc | Q23039 | |||||||
| UniProt_GCRP | UniProtAcc | Q23039 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077078 | ||||||||
| 00077079 | |||||||||
| 00077080 | |||||||||
| 00077081 | |||||||||
| 00125244 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00021205 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable methylated histone binding activity. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Is an ortholog of human SGF29 (SAGA complex associated factor 29). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:8947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25156) | ||||
| Molecular_info | Corresponding_CDS | T22B7.4 | |||||||
| Corresponding_transcript | T22B7.4.1 | ||||||||
| Associated_feature | WBsf653993 | ||||||||
| WBsf653994 | |||||||||
| WBsf670539 | |||||||||
| WBsf1005326 | |||||||||
| WBsf237390 | |||||||||
| WBsf237391 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053796 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035790 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013602 | ||||||||
| Expr1039003 | |||||||||
| Expr1157345 | |||||||||
| Expr2006347 | |||||||||
| Expr2024566 | |||||||||
| Drives_construct | WBCnstr00024970 | ||||||||
| Construct_product | WBCnstr00024970 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Positive | Positive_clone | T22B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -4.42238 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Method | Gene |
