WormBase Tree Display for Gene: WBGene00021171

WBGene00021171 SMap: S_parent: Sequence: Y8A9A
  Identity: Version: 1
    Name: Sequence_name: Y8A9A.2
      Molecular_name: Y8A9A.2
        Y8A9A.2.1
        CE53975
      Other_name: CELE_Y8A9A.2 Accession_evidence: NDB BX284602
      Public_name: Y8A9A.2
    DB_info: Database: AceView gene 2E89
        WormQTL gene WBGene00021171
        WormFlux gene WBGene00021171
        NDB locus_tag CELE_Y8A9A.2
        Panther gene CAEEL|WormBase=WBGene00021171|UniProtKB=Q9TYK4
          family PTHR13723
        NCBI gene 173723
        RefSeq protein NM_001377769.2
        TREEFAM TREEFAM_ID TF316744
        TrEMBL UniProtAcc Q9TYK4
        UniProt_GCRP UniProtAcc Q9TYK4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (117)
    RNASeq_FPKM (74)
    Ortholog: WBGene00025036 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00042872 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00042401 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00076340 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193533 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00063218 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00181491 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      CBOVI.g3246 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g3247 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13081 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16842 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17248 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9541 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14039 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15029 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20593 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g18131 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7794 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00086.g3915 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13573 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04828.g33827 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_24177 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023423 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12145 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12879 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12927 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19154 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0032000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4112 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00128489 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133350 Caenorhabditis japonica From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_053.g28928 Caenorhabditis nigoni From_analysis: WormBase-Compara
      WBGene00265602 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00000082 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000083 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001650 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003242 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009958 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020567 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00086562 Caenorhabditis elegans From_analysis: Panther
      WBGene00003248 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Expressed in g1P; g2L; and g2R. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y8A9A.2
    Corresponding_CDS_history: Y8A9A.2:wp234
      Y8A9A.2:wp274
    Corresponding_transcript: Y8A9A.2.1
    Other_sequence: CRC02076_1
      PP01944
      CR04518
      CR05865
      Tcir_isotig15096
      PPC02557_1
    Associated_feature (6)
  Experimental_info: RNAi_result: WBRNAi00058613 Inferred_automatically: RNAi_primary
      WBRNAi00021527 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10175
      Expr1026225
      Expr1039234
      Expr1162035
      Expr2008495
      Expr2026733
    Drives_construct: WBCnstr00015505
    Microarray_results (17)
    Expression_cluster (151)
    Interaction (53)
  Map_info: Positive: Positive_clone: Y8A9A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -6.21111
  Reference: WBPaper00032277
    WBPaper00039684
    WBPaper00041256
  Method: Gene