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WormBase Tree Display for Gene: WBGene00021161

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Name Class

WBGene00021161SMapS_parentSequenceY4C6B
IdentityVersion1
NameSequence_nameY4C6B.7
Molecular_nameY4C6B.7a
Y4C6B.7a.1
CE41723
Y4C6B.7b
CE49171
Y4C6B.7b.1
Other_nameY4C6B.cCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y4C6B.7Accession_evidenceNDBBX284604
Public_nameY4C6B.7
DB_infoDatabaseAceViewgene4G116
WormQTLgeneWBGene00021161
WormFluxgeneWBGene00021161
NDBlocus_tagCELE_Y4C6B.7
PanthergeneCAEEL|WormBase=WBGene00021161|UniProtKB=Q7YZG3
familyPTHR34721
NCBIgene3565268
RefSeqproteinNM_001028309.6
NM_001306842.3
TrEMBLUniProtAccV6CKD2
Q7YZG3
UniProt_GCRPUniProtAccQ7YZG3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (26)
RNASeq_FPKM (74)
Contained_in_operonCEOP4613
Ortholog (24)
Structured_descriptionAutomated_descriptionEnriched in body wall muscle cell; dopaminergic neurons; g2L; g2R; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including rotenone; Zidovudine; and Psoralens based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY4C6B.7a
Y4C6B.7b
Corresponding_CDS_historyY4C6B.7:wp183
Corresponding_transcriptY4C6B.7a.1
Y4C6B.7b.1
Other_sequence (24)
Associated_featureWBsf651796
Experimental_infoExpr_patternExpr1011129
Expr1160508
Expr2007737
Expr2025980
Microarray_results (13)
Expression_clusterWBPaper00035073:mitochondria_protein
WBPaper00037682:sma-2_downregulated
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_CoreEnriched
WBPaper00037950:bodywall-muscle_embryo_enriched
WBPaper00037950:bodywall-muscle_embryo_SelectivelyEnriched
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_downregulated_L2
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053289:DREAM-target
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:iff-1(RNAi)_upregulated_protein
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060661:hypoxia_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00061340:g2
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062590:Aging_downregulated_neuron
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:4_1
WBPaper00065841:4_2
WBPaper00065841:7_2
WBPaper00065841:7_3
WBPaper00065841:18_0
WBPaper00065841:38_1
WBPaper00065841:38_3
WBPaper00065841:102_0
WBPaper00065841:143_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066038:mip-1(how5)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_1_5
WBPaper00040184:hcf-1up_sir-2.1nc_daf-2up
WBPaper00041207:CE_dauer_up
WBPaper00041606:CE_X.nematophila_regulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Map_infoPositivePositive_cloneY4C6BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV1.5945
MethodGene