WormBase Tree Display for Gene: WBGene00021141

WBGene00021141 SMap: S_parent: Sequence: W10G11
  Identity: Version: 2
    Name: CGC_name: clec-134 Person_evidence: WBPerson2531
      Sequence_name: W10G11.11
      Molecular_name: W10G11.11
        W10G11.11.1
        CE14820
      Other_name: CELE_W10G11.11 Accession_evidence: NDB BX284602
      Public_name: clec-134
    DB_info: Database: AceView gene 2D871
        WormQTL gene WBGene00021141
        WormFlux gene WBGene00021141
        NDB locus_tag CELE_W10G11.11
        Panther gene CAEEL|WormBase=WBGene00021141|UniProtKB=O61212
          family PTHR47629
        NCBI gene 189341
        RefSeq protein NM_062186.2
        TREEFAM TREEFAM_ID TF317657
        TrEMBL UniProtAcc O61212
        UniProt_GCRP UniProtAcc O61212
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-134
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (49)
    RNASeq_FPKM (74)
    Ortholog (15)
    Paralog (114)
    Structured_description: Automated_description: Is affected by several genes including rrf-3; eat-2; and tph-1 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W10G11.11
    Corresponding_transcript: W10G11.11.1
    Associated_feature: WBsf221029
  Experimental_info: RNAi_result: WBRNAi00036434 Inferred_automatically: RNAi_primary
      WBRNAi00055093 Inferred_automatically: RNAi_primary
      WBRNAi00019775 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018077
      Expr1158631
      Expr2028307
    Drives_construct: WBCnstr00024673
    Construct_product: WBCnstr00024673
    Microarray_results (14)
    Expression_cluster: WBPaper00033070:Elbe_downregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00045050:drh-3 (ne4253)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045918:120h_infection_recovery_upregulated
      WBPaper00050504:hrp-2(RNAi)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:male-vas-deferens_expressed
      WBPaper00056169:rrf-3(pk1426)_upregulated_adult
      WBPaper00059117:B.subtilis_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00060921:tbh-1(ok1196)_downregulated
      WBPaper00060921:tph-1(mg280)_downregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064473:ets-4(rrr16)_downregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
      cgc4489_group_14
      WBPaper00030985:Photorhabdus_luminescens_downregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00042128:gei-8(ok1671)_upregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      WBPaper00048989:N2_allantoin_upregulated
      [cgc6390]:male_sex-enriched
    Interaction: WBInteraction000134157
      WBInteraction000134195
      WBInteraction000134197
      WBInteraction000138809
      WBInteraction000193397
      WBInteraction000256040
      WBInteraction000267551
      WBInteraction000423723
  Map_info: Map: II Position: -6.23844 Error: 0.000138
    Positive: Positive_clone: W10G11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00019678
    WBPaper00024296
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene