WormBase Tree Display for Gene: WBGene00021141
expand all nodes | collapse all nodes | view schema
| WBGene00021141 | SMap | S_parent | Sequence | W10G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-134 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | W10G11.11 | ||||||||
| Molecular_name | W10G11.11 | ||||||||
| W10G11.11.1 | |||||||||
| CE14820 | |||||||||
| Other_name | CELE_W10G11.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-134 | ||||||||
| DB_info | Database | AceView | gene | 2D871 | |||||
| WormQTL | gene | WBGene00021141 | |||||||
| WormFlux | gene | WBGene00021141 | |||||||
| NDB | locus_tag | CELE_W10G11.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021141|UniProtKB=O61212 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 189341 | |||||||
| RefSeq | protein | NM_062186.2 | |||||||
| TREEFAM | TREEFAM_ID | TF317657 | |||||||
| TrEMBL | UniProtAcc | O61212 | |||||||
| UniProt_GCRP | UniProtAcc | O61212 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-134 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (114) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including rrf-3; eat-2; and tph-1 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W10G11.11 | |||||||
| Corresponding_transcript | W10G11.11.1 | ||||||||
| Associated_feature | WBsf221029 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036434 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055093 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019775 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018077 | ||||||||
| Expr1158631 | |||||||||
| Expr2028307 | |||||||||
| Drives_construct | WBCnstr00024673 | ||||||||
| Construct_product | WBCnstr00024673 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (42) | |||||||||
| Interaction | WBInteraction000134157 | ||||||||
| WBInteraction000134195 | |||||||||
| WBInteraction000134197 | |||||||||
| WBInteraction000138809 | |||||||||
| WBInteraction000193397 | |||||||||
| WBInteraction000256040 | |||||||||
| WBInteraction000267551 | |||||||||
| WBInteraction000423723 | |||||||||
| Map_info | Map | II | Position | -6.23844 | Error | 0.000138 | |||
| Positive | Positive_clone | W10G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00019678 | ||||||||
| WBPaper00024296 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
