WormBase Tree Display for Gene: WBGene00021088
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| WBGene00021088 | SMap | S_parent | Sequence | W08E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W08E12.7 | |||||||
| Molecular_name | W08E12.7 | ||||||||
| W08E12.7.1 | |||||||||
| CE21275 | |||||||||
| W08E12.7.2 | |||||||||
| Other_name | CELE_W08E12.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | W08E12.7 | ||||||||
| DB_info | Database | AceView | gene | 4E61 | |||||
| WormQTL | gene | WBGene00021088 | |||||||
| WormFlux | gene | WBGene00021088 | |||||||
| NDB | locus_tag | CELE_W08E12.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021088|UniProtKB=Q9N5B3 | |||||||
| family | PTHR10804 | ||||||||
| NCBI | gene | 177097 | |||||||
| RefSeq | protein | NM_067910.9 | |||||||
| TREEFAM | TREEFAM_ID | TF300010 | |||||||
| TrEMBL | UniProtAcc | Q9N5B3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5B3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4617 | ||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00000155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00003129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009960 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012075 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019673 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020088 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021555 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Expressed in gonad and pharynx. Human PA2G4 enables nucleic acid binding activity; transcription corepressor activity; and ubiquitin protein ligase binding activity. Is predicted to encode a protein with the following domains: PA2G4 family; Winged helix DNA-binding domain superfamily; Proliferation-associated protein 2G4/ARX1; Metallopeptidase family M24; Winged helix-like DNA-binding domain superfamily; Creatinase/aminopeptidase-like; Peptidase M24; and Phosphorylation site. Is an ortholog of human PA2G4 (proliferation-associated 2G4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08E12.7 | |||||||
| Corresponding_transcript | W08E12.7.1 | ||||||||
| W08E12.7.2 | |||||||||
| Other_sequence (86) | |||||||||
| Associated_feature | WBsf655016 | ||||||||
| WBsf977071 | |||||||||
| WBsf977072 | |||||||||
| WBsf977073 | |||||||||
| WBsf977074 | |||||||||
| WBsf977075 | |||||||||
| WBsf228081 | |||||||||
| WBsf228082 | |||||||||
| WBsf228083 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036382 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061904 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054987 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019719 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7702 | ||||||||
| Expr1018825 | |||||||||
| Expr1039201 | |||||||||
| Expr1158520 | |||||||||
| Expr2006857 | |||||||||
| Expr2025082 | |||||||||
| Drives_construct | WBCnstr00012847 | ||||||||
| WBCnstr00024692 | |||||||||
| WBCnstr00042402 | |||||||||
| Construct_product | WBCnstr00024692 | ||||||||
| WBCnstr00042402 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (202) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | W08E12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -4.76979 | |||||||
| Reference | WBPaper00024478 | ||||||||
| WBPaper00032230 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
