WormBase Tree Display for Gene: WBGene00020915
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| WBGene00020915 | SMap | S_parent | Sequence | W01B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nol-58 | Person_evidence | WBPerson3772 | |||||
| WBPerson38007 | |||||||||
| Sequence_name | W01B11.3 | ||||||||
| Molecular_name | W01B11.3 | ||||||||
| W01B11.3.1 | |||||||||
| CE18307 | |||||||||
| Other_name | nol-5 | Person_evidence | WBPerson3772 | ||||||
| CELE_W01B11.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nol-58 | ||||||||
| DB_info | Database | AceView | gene | 1D835 | |||||
| WormQTL | gene | WBGene00020915 | |||||||
| WormFlux | gene | WBGene00020915 | |||||||
| NDB | locus_tag | CELE_W01B11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020915|UniProtKB=O45012 | |||||||
| family | PTHR10894 | ||||||||
| NCBI | gene | 171901 | |||||||
| RefSeq | protein | NM_001393196.1 | |||||||
| TREEFAM | TREEFAM_ID | TF105688 | |||||||
| TrEMBL | UniProtAcc | O45012 | |||||||
| UniProt_GCRP | UniProtAcc | O45012 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Aug 2007 14:29:26 | WBPerson2970 | Name_change | CGC_name | nol-5 | ||||
| 3 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | nol-58 | ||||
| Other_name | nol-5 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nol | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033797 | ||||||||
| 00033798 | |||||||||
| 00033799 | |||||||||
| 00033800 | |||||||||
| 00033801 | |||||||||
| 00033802 | |||||||||
| 00125433 | |||||||||
| 00125434 | |||||||||
| 00125435 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00010627 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable snoRNA binding activity. Predicted to be involved in ribosome biogenesis. Predicted to be located in nucleolus. Predicted to be part of box C/D RNP complex and small-subunit processome. Is an ortholog of human NOP58 (NOP58 ribonucleoprotein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W01B11.3 | |||||||
| Corresponding_transcript | W01B11.3.1 | ||||||||
| Other_sequence (110) | |||||||||
| Associated_feature | WBsf643138 | ||||||||
| WBsf654777 | |||||||||
| WBsf656109 | |||||||||
| WBsf217383 | |||||||||
| WBsf217384 | |||||||||
| WBsf217385 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1021656 | ||||||||
| Expr1039113 | |||||||||
| Expr1158046 | |||||||||
| Expr2014350 | |||||||||
| Expr2032591 | |||||||||
| Drives_construct | WBCnstr00024789 | ||||||||
| Construct_product | WBCnstr00024789 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (185) | |||||||||
| Interaction (338) | |||||||||
| Map_info | Map | I | Position | -4.10031 | Error | 0.026225 | |||
| Positive | Positive_clone | W01B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029435 | ||||||||
| WBPaper00031019 | |||||||||
| WBPaper00032197 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062599 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
