WormBase Tree Display for Gene: WBGene00020851

WBGene00020851 SMap: S_parent: Sequence: T27B7
  Identity: Version: 2
    Name: CGC_name: nhr-227 Person_evidence: WBPerson600
      Sequence_name: T27B7.5
      Molecular_name: T27B7.5a
        T27B7.5a.1
        CE52889
        T27B7.5b
      Other_name: CELE_T27B7.5 Accession_evidence: NDB BX284605
      Public_name: nhr-227
    DB_info: Database: AceView gene 5C765
        WormQTL gene WBGene00020851
        WormFlux gene WBGene00020851
        NDB locus_tag CELE_T27B7.5
        Panther gene CAEEL|WormBase=WBGene00020851|UniProtKB=G4SR04
          family PTHR45680
        NCBI gene 188976
        RefSeq protein NM_001269084.4
            NR_133583.2
        TrEMBL UniProtAcc G4SR04
        UniProt_GCRP UniProtAcc G4SR04
        RNAcentral URSid URS0000E60BDE
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Jul 2005 10:29:12 WBPerson2970 Name_change: CGC_name: nhr-227
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (60)
    Strain: WBStrain00036484
    RNASeq_FPKM (74)
    GO_annotation: 00009341
      00009342
      00009343
      00125395
      00125396
      00125397
      00125398
    Ortholog (20)
    Paralog (217)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T27B7.5a
    Corresponding_CDS_history: T27B7.5:wp197
      T27B7.5:wp211
      T27B7.5a:wp268
      T27B7.5b:wp250
    Corresponding_transcript: T27B7.5b
      T27B7.5a.1
    Corresponding_transcript_history: T27B7.5b:wp268
    Other_sequence: MCC01034_1
      CBC10509_1
      FD516872.1
      CSC01557_1
      MC02389
      MH04413
      MI00400
    Associated_feature: WBsf661001
      WBsf978449
      WBsf231498
      WBsf231499
    Transcription_factor: WBTranscriptionFactor000789
  Experimental_info: RNAi_result: WBRNAi00054277 Inferred_automatically: RNAi_primary
      WBRNAi00091039 Inferred_automatically: RNAi_primary
      WBRNAi00019311 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021189
      Expr1157827
      Expr2014128
      Expr2032367
    Drives_construct: WBCnstr00024838
    Construct_product: WBCnstr00024838
    Microarray_results (18)
    Expression_cluster (37)
    SAGE_tag: SAGE:ttatcagatt Strand: Sense
        Unambiguously_mapped
      SAGE:agatctgcca Strand: Antisense
      SAGE:tttggagcaa Strand: Sense
        Unambiguously_mapped
      SAGE:aaagttaaca Strand: Sense
        Unambiguously_mapped
      SAGE:aatgttgatt Strand: Antisense
      SAGE:ctctacaagt Strand: Antisense
      SAGE:ttcgctcaac Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000187095
  Map_info: Map: V Position: -14.9871 Error: 0.005473
    Positive: Positive_clone: T27B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene