WormBase Tree Display for Gene: WBGene00020847
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| WBGene00020847 | SMap | S_parent | Sequence | T27A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | cgr-1 | Person_evidence | WBPerson341 | |||||
| Sequence_name | T27A10.7 | ||||||||
| Molecular_name | T27A10.7 | ||||||||
| T27A10.7.1 | |||||||||
| CE37679 | |||||||||
| Other_name | tag-133 | Person_evidence | WBPerson201 | ||||||
| CELE_T27A10.7 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | cgr-1 | ||||||||
| DB_info | Database | AceView | gene | XE216 | |||||
| WormQTL | gene | WBGene00020847 | |||||||
| WormFlux | gene | WBGene00020847 | |||||||
| NDB | locus_tag | CELE_T27A10.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020847|UniProtKB=Q22824 | |||||||
| family | PTHR23324 | ||||||||
| NCBI | gene | 180650 | |||||||
| RefSeq | protein | NM_076217.7 | |||||||
| TREEFAM | TREEFAM_ID | TF313988 | |||||||
| TrEMBL | UniProtAcc | Q22824 | |||||||
| UniProt_GCRP | UniProtAcc | Q22824 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Nov 2004 16:11:20 | WBPerson2970 | Name_change | CGC_name | cgr-1 | ||||
| 3 | 06 Oct 2005 10:08:13 | WBPerson2970 | Event | Acquires_merge | WBGene00006480 | ||||
| Name_change | Other_name | tag-133 | |||||||
| Acquires_merge | WBGene00006480 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cgr | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00027266 | ||||||||
| WBStrain00031726 | |||||||||
| WBStrain00035793 | |||||||||
| WBStrain00040578 | |||||||||
| WBStrain00040579 | |||||||||
| WBStrain00040580 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076548 | ||||||||
| 00076549 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Located in cytoplasm. Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27A10.7 | |||||||
| Corresponding_CDS_history | T27A10.7:wp109 | ||||||||
| T27A10.7:wp133 | |||||||||
| Corresponding_transcript | T27A10.7.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf653852 | ||||||||
| WBsf670346 | |||||||||
| WBsf670347 | |||||||||
| WBsf670348 | |||||||||
| WBsf237191 | |||||||||
| WBsf237192 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054258 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062668 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019300 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3745 | ||||||||
| Expr1010808 | |||||||||
| Expr1157805 | |||||||||
| Expr2009945 | |||||||||
| Expr2028185 | |||||||||
| Drives_construct | WBCnstr00011642 | ||||||||
| WBCnstr00024840 | |||||||||
| Construct_product | WBCnstr00011642 | ||||||||
| WBCnstr00024840 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction | WBInteraction000005491 | ||||||||
| WBInteraction000005492 | |||||||||
| WBInteraction000005493 | |||||||||
| WBInteraction000005494 | |||||||||
| WBInteraction000558383 | |||||||||
| WBInteraction000566086 | |||||||||
| WBInteraction000576745 | |||||||||
| WBInteraction000581185 | |||||||||
| WBInteraction000583611 | |||||||||
| WBInteraction000586643 | |||||||||
| Map_info | Map | X | Position | -9.99748 | Error | 0.017886 | |||
| Positive | Positive_clone | T27A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5042 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026855 | ||||||||
| WBPaper00033118 | |||||||||
| WBPaper00036028 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
