WormBase Tree Display for Gene: WBGene00020847
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WBGene00020847 | SMap | S_parent | Sequence | T27A10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | cgr-1 | Person_evidence | WBPerson341 | |||
Sequence_name | T27A10.7 | ||||||
Molecular_name | T27A10.7 | ||||||
T27A10.7.1 | |||||||
CE37679 | |||||||
Other_name | tag-133 | Person_evidence | WBPerson201 | ||||
CELE_T27A10.7 | Accession_evidence | NDB | BX284606 | ||||
Public_name | cgr-1 | ||||||
DB_info | Database | AceView | gene | XE216 | |||
WormQTL | gene | WBGene00020847 | |||||
WormFlux | gene | WBGene00020847 | |||||
NDB | locus_tag | CELE_T27A10.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020847|UniProtKB=Q22824 | |||||
family | PTHR23324 | ||||||
NCBI | gene | 180650 | |||||
RefSeq | protein | NM_076217.7 | |||||
TREEFAM | TREEFAM_ID | TF313988 | |||||
TrEMBL | UniProtAcc | Q22824 | |||||
UniProt_GCRP | UniProtAcc | Q22824 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cgr | ||||||
Allele (53) | |||||||
Strain | WBStrain00027266 | ||||||
WBStrain00031726 | |||||||
WBStrain00035793 | |||||||
WBStrain00040578 | |||||||
WBStrain00040579 | |||||||
WBStrain00040580 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00076548 | ||||||
00076549 | |||||||
Ortholog (31) | |||||||
Paralog (11) | |||||||
Structured_description | Automated_description | Located in cytoplasm. Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T27A10.7 | |||||
Corresponding_CDS_history | T27A10.7:wp109 | ||||||
T27A10.7:wp133 | |||||||
Corresponding_transcript | T27A10.7.1 | ||||||
Other_sequence (16) | |||||||
Associated_feature | WBsf653852 | ||||||
WBsf670346 | |||||||
WBsf670347 | |||||||
WBsf670348 | |||||||
WBsf237191 | |||||||
WBsf237192 | |||||||
Experimental_info | RNAi_result | WBRNAi00054258 | Inferred_automatically | RNAi_primary | |||
WBRNAi00033522 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062668 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019300 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3745 | ||||||
Expr1010808 | |||||||
Expr1157805 | |||||||
Expr2009945 | |||||||
Expr2028185 | |||||||
Drives_construct | WBCnstr00011642 | ||||||
WBCnstr00024840 | |||||||
Construct_product | WBCnstr00011642 | ||||||
WBCnstr00024840 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (144) | |||||||
Interaction | WBInteraction000005491 | ||||||
WBInteraction000005492 | |||||||
WBInteraction000005493 | |||||||
WBInteraction000005494 | |||||||
WBInteraction000558383 | |||||||
WBInteraction000566086 | |||||||
WBInteraction000576745 | |||||||
WBInteraction000581185 | |||||||
WBInteraction000583611 | |||||||
WBInteraction000586643 | |||||||
Map_info | Map | X | Position | -9.99748 | Error | 0.017886 | |
Positive | Positive_clone | T27A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5042 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00026855 | ||||||
WBPaper00033118 | |||||||
WBPaper00036028 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |