WormBase Tree Display for Gene: WBGene00020836
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WBGene00020836 | SMap | S_parent | Sequence | T27A1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | lgc-34 | Person_evidence | WBPerson2536 | |||
WBPerson1430 | |||||||
Sequence_name | T27A1.4 | ||||||
Molecular_name | T27A1.4 | ||||||
T27A1.4.1 | |||||||
CE14211 | |||||||
Other_name | CELE_T27A1.4 | Accession_evidence | NDB | BX284602 | |||
Public_name | lgc-34 | ||||||
DB_info | Database | AceView | gene | 2A819 | |||
WormQTL | gene | WBGene00020836 | |||||
WormFlux | gene | WBGene00020836 | |||||
NDB | locus_tag | CELE_T27A1.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020836|UniProtKB=O17274 | |||||
family | PTHR18945 | ||||||
NCBI | gene | 173443 | |||||
RefSeq | protein | NM_061351.7 | |||||
TREEFAM | TREEFAM_ID | TF316560 | |||||
TrEMBL | UniProtAcc | O17274 | |||||
UniProt_GCRP | UniProtAcc | O17274 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lgc | ||||||
Allele (81) | |||||||
Strain | WBStrain00036379 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (28) | |||||||
Paralog (100) | |||||||
Structured_description | Automated_description | Predicted to enable neurotransmitter receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Located in plasma membrane. Expressed in head and intestinal muscle. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T27A1.4 | |||||
Corresponding_transcript | T27A1.4.1 | ||||||
Other_sequence (57) | |||||||
Associated_feature | WBsf643910 | ||||||
WBsf643911 | |||||||
WBsf657278 | |||||||
WBsf986430 | |||||||
WBsf1011407 | |||||||
WBsf220764 | |||||||
Experimental_info | RNAi_result | WBRNAi00036011 | Inferred_automatically | RNAi_primary | |||
WBRNAi00019293 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054250 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061406 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1405 | ||||||
Expr6782 | |||||||
Expr6783 | |||||||
Expr9457 | |||||||
Expr1028482 | |||||||
Expr1039081 | |||||||
Expr1157797 | |||||||
Expr2013113 | |||||||
Expr2031345 | |||||||
Drives_construct | WBCnstr00003095 | ||||||
WBCnstr00004539 | |||||||
WBCnstr00024850 | |||||||
Construct_product | WBCnstr00014022 | ||||||
WBCnstr00024850 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (172) | |||||||
Interaction | WBInteraction000540392 | ||||||
WBInteraction000552911 | |||||||
WBInteraction000556293 | |||||||
Map_info | Map | II | Position | -15.5959 | Error | 0.000164 | |
Positive | Positive_clone | T27A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00024647 | ||||||
WBPaper00031006 | |||||||
WBPaper00031536 | |||||||
WBPaper00038444 | |||||||
WBPaper00052900 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |