WormBase Tree Display for Gene: WBGene00020711
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WBGene00020711 | SMap | S_parent | Sequence | T23B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 1H289 | |||||
WormQTL | gene | WBGene00020711 | |||||||
WormFlux | gene | WBGene00020711 | |||||||
NDB | locus_tag | CELE_T23B3.3 | |||||||
NCBI | gene | 188773 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Nov 2007 10:25:06 | WBPerson2970 | Name_change | CGC_name | rmd-5 | ||||
3 | 15 Dec 2014 16:26:44 | WBPerson1983 | Event | Split_into | WBGene00255605 | ||||
Split_into | WBGene00255605 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0000336 | |||||||
Gene_class | rmd | ||||||||
Allele (12) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00142298 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
WBGene00191028 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WBGene00138135 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
WBGene00066579 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
Paralog | WBGene00007190 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00007786 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00009369 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00011501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00012976 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00015855 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00018125 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00020070 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Automated_description | Enriched in ASK; OLQ; and neurons based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on RNA-seq and microarray studies. Is affected by multi-walled carbon nanotube; metformin; and cadmium based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS_history | T23B3.3:wp246 | |||||||
Corresponding_pseudogene | T23B3.3 | ||||||||
Associated_feature | WBsf983983 | ||||||||
WBsf983984 | |||||||||
WBsf1009982 | |||||||||
WBsf1009983 | |||||||||
Experimental_info | Expr_pattern | Expr1025515 | |||||||
Expr1157439 | |||||||||
Microarray_results | SMD_T23B3.3 | ||||||||
182067_at | |||||||||
Aff_T23B3.3 | |||||||||
GPL14144_T23B3.3_317-376_0.916_4_A | |||||||||
GPL19516_CGZ0036194 | |||||||||
GPL21109_T23B3.3 | |||||||||
Expression_cluster (51) | |||||||||
Interaction | WBInteraction000342230 | ||||||||
WBInteraction000393808 | |||||||||
WBInteraction000413336 | |||||||||
WBInteraction000442148 | |||||||||
WBInteraction000442266 | |||||||||
WBInteraction000459116 | |||||||||
Map_info | Map | I | Position | 1.29443 | Error | 0.002145 | |||
Positive | Positive_clone | T23B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |