WormBase Tree Display for Gene: WBGene00020578
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WBGene00020578 | SMap | S_parent | Sequence | T19D12 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0000336 | ||||
Allele | WBVar01499702 | |||||
WBVar01498435 | ||||||
WBVar00739479 | ||||||
WBVar00739480 | ||||||
WBVar00739481 | ||||||
WBVar00739482 | ||||||
WBVar00368640 | ||||||
WBVar00368641 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00086947 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||
WBGene00214436 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||
Paralog | WBGene00016004 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00019273 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00020576 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00020577 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Enriched in CEP socket cell; GABAergic neurons; excretory cell; and intestine based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by seventeen chemicals including methylmercuric chloride; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS_history | T19D12.3:wp274 | ||||
Corresponding_pseudogene | T19D12.3 | |||||
Associated_feature | WBsf221476 | |||||
Experimental_info | Expr_pattern | Expr1022815 | ||||
Expr1157099 | ||||||
Expr2006259 | ||||||
Expr2024477 | ||||||
Drives_construct | WBCnstr00025036 | |||||
Construct_product | WBCnstr00025036 | |||||
Microarray_results (14) | ||||||
Expression_cluster (88) | ||||||
Interaction | WBInteraction000190684 | |||||
WBInteraction000201863 | ||||||
WBInteraction000229089 | ||||||
WBInteraction000276851 | ||||||
WBInteraction000281918 | ||||||
WBInteraction000328600 | ||||||
WBInteraction000335858 | ||||||
WBInteraction000353261 | ||||||
WBInteraction000399967 | ||||||
WBInteraction000444853 | ||||||
Map_info | Positive | Positive_clone | T19D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | -0.0475057 | ||||
Method | Gene |