WormBase Tree Display for Gene: WBGene00020562
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WBGene00020562 | SMap | S_parent | Sequence | T19C3 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (62) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00055874 | |||||
00055875 | ||||||
00055876 | ||||||
00055877 | ||||||
00055878 | ||||||
00055879 | ||||||
00055880 | ||||||
Ortholog (50) | ||||||
Paralog | WBGene00011401 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00012180 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00015518 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00018930 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00022452 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00022127 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable microtubule binding activity. Predicted to be involved in endoplasmic reticulum tubular network organization. Predicted to be located in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. Human ortholog(s) of this gene implicated in distal hereditary motor neuronopathy type 5B; hereditary spastic paraplegia 31; and hereditary spastic paraplegia 72. Is an ortholog of human REEP1 (receptor accessory protein 1) and REEP4 (receptor accessory protein 4). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | EFO:MONDO:0015363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25786) | |
DOID:0110817 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17975) | |||
DOID:0111205 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25786) | |||
DOID:0110782 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25786) | |||
Molecular_info | Corresponding_CDS | T19C3.4 | ||||
Corresponding_transcript | T19C3.4.1 | |||||
Other_sequence (27) | ||||||
Associated_feature | WBsf717855 | |||||
WBsf717856 | ||||||
WBsf991105 | ||||||
WBsf1014098 | ||||||
WBsf226114 | ||||||
Experimental_info | RNAi_result | WBRNAi00035656 | Inferred_automatically | RNAi_primary | ||
WBRNAi00053507 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00006621 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1027058 | |||||
Expr1038963 | ||||||
Expr1157074 | ||||||
Expr2006247 | ||||||
Expr2024465 | ||||||
Drives_construct | WBCnstr00025049 | |||||
Construct_product | WBCnstr00025049 | |||||
Microarray_results (18) | ||||||
Expression_cluster (110) | ||||||
Interaction | WBInteraction000151374 | |||||
WBInteraction000264448 | ||||||
WBInteraction000267730 | ||||||
WBInteraction000356250 | ||||||
WBInteraction000385891 | ||||||
WBInteraction000581171 | ||||||
Map_info | Positive | Positive_clone | T19C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | -26.5073 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |