WormBase Tree Display for Gene: WBGene00020549
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| WBGene00020549 | SMap | S_parent | Sequence | T17E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nmt-1 | Person_evidence | WBPerson451 | |||||
| Sequence_name | T17E9.2 | ||||||||
| Molecular_name | T17E9.2a | ||||||||
| T17E9.2a.1 | |||||||||
| CE01406 | |||||||||
| T17E9.2b | |||||||||
| CE28669 | |||||||||
| T17E9.2b.1 | |||||||||
| T17E9.2c | |||||||||
| Other_name | CELE_T17E9.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nmt-1 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Feb 2007 14:58:34 | WBPerson2970 | Name_change | CGC_name | nmt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nmt | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00003745 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (43) | |||||||||
| Structured_description | Concise_description | nmt-1 encodes an N-myristoyl transferase; by homology, NMT-1 is predicted to catalyze the cotranslational attachment of myristate from CoA to the N-terminal glycine residue of proteins; in C. elegans, nmt-1 is widely expressed and required for a number of diverse processes, including development, locomotion, and apoptosis. | Paper_evidence | WBPaper00024497 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 29 Jan 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycylpeptide N-tetradecanoyltransferase activity. Predicted to be located in cytoplasm. Used to study muscular disease. Is an ortholog of human NMT1 (N-myristoyltransferase 1) and NMT2 (N-myristoyltransferase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0080000 | Homo sapiens | Paper_evidence | WBPaper00061805 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Apr 2022 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00001163 | ||||||||
| Molecular_info | Corresponding_CDS | T17E9.2a | |||||||
| T17E9.2b | |||||||||
| Corresponding_CDS_history | T17E9.2c:wp245 | ||||||||
| Corresponding_transcript | T17E9.2c | ||||||||
| T17E9.2a.1 | |||||||||
| T17E9.2b.1 | |||||||||
| Other_sequence (74) | |||||||||
| Associated_feature | WBsf992646 | ||||||||
| WBsf1015031 | |||||||||
| WBsf226762 | |||||||||
| WBsf226763 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr6703 | ||||||||
| Expr1020150 | |||||||||
| Expr1038954 | |||||||||
| Expr1157025 | |||||||||
| Expr2014335 | |||||||||
| Expr2032576 | |||||||||
| Drives_construct | WBCnstr00004180 | ||||||||
| WBCnstr00025061 | |||||||||
| Construct_product | WBCnstr00025061 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (128) | |||||||||
| Map_info | Map | III | Position | -1.41923 | Error | 0.000682 | |||
| Positive | Positive_clone | T17E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041831 | |||||||||
| WBPaper00045694 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061805 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
