WormBase Tree Display for Gene: WBGene00020423
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| WBGene00020423 | SMap | S_parent | Sequence | K10D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | prp-19 | Person_evidence | WBPerson261 | |||||
| Sequence_name | T10F2.4 | ||||||||
| Molecular_name | T10F2.4 | ||||||||
| T10F2.4.1 | |||||||||
| CE38104 | |||||||||
| Other_name | CELE_T10F2.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | prp-19 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Apr 2012 16:20:48 | WBPerson2970 | Name_change | CGC_name | prp-19 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prp | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00002670 | ||||||||
| WBStrain00036507 | |||||||||
| WBStrain00036582 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Contained_in_operon | CEOP3260 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00012887 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Involved in nuclear mRNA surveillance. Predicted to be located in cytoplasm and nucleus. Predicted to be part of Prp19 complex and U2-type catalytic step 1 spliceosome. Is an ortholog of human PRPF19 (pre-mRNA processing factor 19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10F2.4 | |||||||
| Corresponding_CDS_history | T10F2.4:wp138 | ||||||||
| Corresponding_transcript | T10F2.4.1 | ||||||||
| Other_sequence (80) | |||||||||
| Associated_feature | WBsf651034 | ||||||||
| WBsf651035 | |||||||||
| WBsf226645 | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Chronogram282 | ||||||||
| Expr6665 | |||||||||
| Expr1016682 | |||||||||
| Expr1038907 | |||||||||
| Expr1156670 | |||||||||
| Expr2015109 | |||||||||
| Expr2033347 | |||||||||
| Drives_construct | WBCnstr00003212 | ||||||||
| WBCnstr00025152 | |||||||||
| Construct_product | WBCnstr00025152 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (162) | |||||||||
| Map_info | Map | III | Position | -2.04089 | |||||
| Positive | Positive_clone | T10F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
