WormBase Tree Display for Gene: WBGene00020388
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| WBGene00020388 | SMap | S_parent | Sequence | T10B5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T10B5.2 | ||||||||
| Molecular_name | T10B5.2a | |||||||||
| T10B5.2b | ||||||||||
| Other_name | CELE_T10B5.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | T10B5.2 | |||||||||
| DB_info | Database | AceView | gene | 5C326 | ||||||
| WormQTL | gene | WBGene00020388 | ||||||||
| WormFlux | gene | WBGene00020388 | ||||||||
| NDB | locus_tag | CELE_T10B5.2 | ||||||||
| NCBI | gene | 353437 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 23 Jul 2015 12:53:17 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (75) | ||||||||||
| Strain | WBStrain00003510 | |||||||||
| WBStrain00037546 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00040495 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00157162 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00123844 | Caenorhabditis japonica | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00082417 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Paralog | WBGene00019561 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00019562 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; male distal tip cell; somatic gonad precursor; and in male based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; methylmercuric chloride; and manganese chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T10B5.2:wp93 | ||||||||
| T10B5.2:wp112 | ||||||||||
| T10B5.2:wp230 | ||||||||||
| T10B5.2:wp249 | ||||||||||
| Corresponding_pseudogene | T10B5.2a | |||||||||
| T10B5.2b | ||||||||||
| Associated_feature | WBsf668776 | |||||||||
| WBsf999404 | ||||||||||
| Experimental_info | Expr_pattern | Expr6656 | ||||||||
| Expr1156606 | ||||||||||
| Drives_construct | WBCnstr00003968 | |||||||||
| Microarray_results | SMD_T10B5.1 | |||||||||
| SMD_T10B5.2 | ||||||||||
| SMD_T10B5.7 | ||||||||||
| 180170_at | ||||||||||
| Aff_T10B5.2 | ||||||||||
| GPL8304_CE_WBGene00020388_A | ||||||||||
| GPL8673_T10B5_2P00478 | ||||||||||
| Expression_cluster (105) | ||||||||||
| Interaction | WBInteraction000335334 | |||||||||
| WBInteraction000450302 | ||||||||||
| Map_info | Positive | Positive_clone | T10B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -16.9727 | ||||||||
| Reference | WBPaper00027258 | |||||||||
| Method | Gene |
