WormBase Tree Display for Gene: WBGene00020315
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| WBGene00020315 | SMap | S_parent | Sequence | T07E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T07E3.4 | |||||||
| Molecular_name | T07E3.4a | ||||||||
| T07E3.4a.1 | |||||||||
| CE01385 | |||||||||
| T07E3.4b | |||||||||
| CE32717 | |||||||||
| T07E3.4b.1 | |||||||||
| T07E3.4b.2 | |||||||||
| Other_name | CELE_T07E3.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T07E3.4 | ||||||||
| DB_info | Database | AceView | gene | 3H989 | |||||
| WormQTL | gene | WBGene00020315 | |||||||
| WormFlux | gene | WBGene00020315 | |||||||
| NDB | locus_tag | CELE_T07E3.4 | |||||||
| NCBI | gene | 175961 | |||||||
| RefSeq | protein | NM_001392132.1 | |||||||
| NM_066100.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF321966 | |||||||
| TrEMBL | UniProtAcc | Q22310 | |||||||
| Q8IFZ1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q22310 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in muscle cell; sensory neurons; and somatic gonad precursor based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on tiling array; RNA-seq; and microarray studies. Is affected by sixteen chemicals including methylmercuric chloride; Tunicamycin; and levamisole based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07E3.4a | |||||||
| T07E3.4b | |||||||||
| Corresponding_transcript | T07E3.4a.1 | ||||||||
| T07E3.4b.1 | |||||||||
| T07E3.4b.2 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature | WBsf645300 | ||||||||
| WBsf659130 | |||||||||
| WBsf992894 | |||||||||
| WBsf1015168 | |||||||||
| WBsf225167 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018373 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005574 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052764 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035308 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026558 | ||||||||
| Expr1038850 | |||||||||
| Expr1156373 | |||||||||
| Expr2005971 | |||||||||
| Expr2024186 | |||||||||
| Drives_construct | WBCnstr00025228 | ||||||||
| Construct_product | WBCnstr00025228 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction | WBInteraction000318673 | ||||||||
| WBInteraction000441374 | |||||||||
| WBInteraction000504179 | |||||||||
| WBInteraction000549983 | |||||||||
| WBInteraction000549992 | |||||||||
| WBInteraction000550003 | |||||||||
| WBInteraction000569074 | |||||||||
| Map_info | Positive | Positive_clone | T07E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.907216 | |||||||
| Reference | WBPaper00012854 | ||||||||
| WBPaper00059375 | |||||||||
| Method | Gene |
