WormBase Tree Display for Gene: WBGene00020230
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| WBGene00020230 | SMap | S_parent | Sequence | T05A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nep-2 | Person_evidence | WBPerson284 | |||||
| WBPerson50 | |||||||||
| Sequence_name | T05A8.4 | ||||||||
| Molecular_name | T05A8.4 | ||||||||
| T05A8.4.1 | |||||||||
| CE30162 | |||||||||
| Other_name | CELE_T05A8.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nep-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Mar 2007 13:57:19 | WBPerson2970 | Name_change | CGC_name | nep-2 | ||||
| 3 | 02 Mar 2018 11:09:16 | WBPerson4025 | Event | Split_into | WBGene00303077 | ||||
| Split_into | WBGene00303077 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nep | ||||||||
| Allele (278) | |||||||||
| Strain | WBStrain00022691 | ||||||||
| WBStrain00022693 | |||||||||
| WBStrain00032820 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (47) | |||||||||
| Paralog (24) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||
| DOID:9246 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||||
| DOID:0111745 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||||
| DOID:10976 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||||
| DOID:0050445 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8918) | ||||||
| DOID:0110160 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||||
| DOID:824 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7154) | ||||||
| Molecular_info | Corresponding_CDS | T05A8.4 | |||||||
| Corresponding_CDS_history | T05A8.4a:wp264 | ||||||||
| T05A8.4b:wp264 | |||||||||
| Corresponding_transcript | T05A8.4.1 | ||||||||
| Other_sequence | MJC03389_1 | ||||||||
| FF681814.1 | |||||||||
| PTC01016_1 | |||||||||
| JI219925.1 | |||||||||
| HC09568 | |||||||||
| Dviv_isotig25232 | |||||||||
| MJ03308 | |||||||||
| CJC05737_1 | |||||||||
| JI235025.1 | |||||||||
| PT01198 | |||||||||
| MH06239 | |||||||||
| MIC07122_1 | |||||||||
| Oden_isotig22396 | |||||||||
| ACC20052_1 | |||||||||
| Oden_isotig14684 | |||||||||
| MHC02683_1 | |||||||||
| EX547705.1 | |||||||||
| HBC13614_1 | |||||||||
| Oden_isotig14683 | |||||||||
| Acan_isotig10168 | |||||||||
| CBC00380_1 | |||||||||
| Associated_feature (17) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035173 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052456 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089146 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052455 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018193 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9142 | ||||||||
| Expr9143 | |||||||||
| Expr1016088 | |||||||||
| Expr1038804 | |||||||||
| Expr1156079 | |||||||||
| Expr2013972 | |||||||||
| Expr2032211 | |||||||||
| Drives_construct | WBCnstr00013743 | ||||||||
| WBCnstr00013744 | |||||||||
| WBCnstr00025281 | |||||||||
| Construct_product | WBCnstr00013744 | ||||||||
| WBCnstr00025281 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction | WBInteraction000031218 | ||||||||
| WBInteraction000244220 | |||||||||
| WBInteraction000380973 | |||||||||
| WBInteraction000392441 | |||||||||
| WBInteraction000469209 | |||||||||
| WBInteraction000469309 | |||||||||
| WBInteraction000521695 | |||||||||
| WBInteraction000521698 | |||||||||
| WBInteraction000553913 | |||||||||
| Map_info | Map | II | Position | -11.8249 | Error | 0.020198 | |||
| Positive | Positive_clone | T05A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
