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WormBase Tree Display for Gene: WBGene00020215

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Name Class

WBGene00020215SMapS_parentSequenceT04G9
IdentityVersion1
NameSequence_nameT04G9.4
Molecular_nameT04G9.4
T04G9.4.1
CE04885
Other_nameCELE_T04G9.4Accession_evidenceNDBBX284606
Public_nameT04G9.4
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (70)
RNASeq_FPKM (74)
GO_annotation00074418
00074419
00074420
00074421
00074422
00124902
00124903
Contained_in_operonCEOPX147
Ortholog (35)
ParalogWBGene00012142Caenorhabditis elegansFrom_analysis (3)
Structured_descriptionAutomated_descriptionPredicted to enable holo-[acyl-carrier-protein] synthase activity. Predicted to be involved in lysine biosynthetic process via aminoadipic acid. Predicted to be located in cytosol. Is an ortholog of human AASDHPPT (aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST04G9.4
Corresponding_transcriptT04G9.4.1
Other_sequence (36)
Associated_featureWBsf647794
WBsf662436
WBsf1003860
WBsf1003861
WBsf235282
Experimental_infoRNAi_resultWBRNAi00035149Inferred_automaticallyRNAi_primary
WBRNAi00111027Inferred_automaticallyRNAi_primary
WBRNAi00108659Inferred_automaticallyRNAi_primary
WBRNAi00052410Inferred_automaticallyRNAi_primary
WBRNAi00110999Inferred_automaticallyRNAi_primary
WBRNAi00095070Inferred_automaticallyRNAi_primary
WBRNAi00026186Inferred_automaticallyRNAi_primary
WBRNAi00009110Inferred_automaticallyRNAi_primary
WBRNAi00108584Inferred_automaticallyRNAi_primary
Expr_patternExpr1020385
Expr1038797
Expr1156035
Expr2005832
Expr2024049
Drives_constructWBCnstr00025293
Construct_productWBCnstr00025293
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:hypodermis_CoreEnriched
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046121:ecdoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050686:glp-1(e2141)_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00055060:flr-1(RNAi)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059987:Wounding_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AMso
WBPaper00061340:B
WBPaper00061340:CAN
WBPaper00061340:CEPsh
WBPaper00061340:CEPso
WBPaper00061340:Excretory_duct_and_pore
WBPaper00061340:F_U
WBPaper00061340:G2_and_W_blasts
WBPaper00061340:Glia
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061340:hyp1_hyp2
WBPaper00061340:hyp3
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061340:K_Kprime
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Parent_of_hyp3_ILsoDx
WBPaper00061340:RID_parent
WBPaper00061340:Seam_cell
WBPaper00061340:T
WBPaper00061340:Y
WBPaper00061527:mlt-9_22518-F33D4.6_14044
WBPaper00061651:CAN_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062590:Aging_downregulated_intestine
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064716:paraquat_downregulated
WBPaper00065199:Transgeneration-starvation_regulated_starved
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065841:0_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_8
WBPaper00025032:cluster_24
WBPaper00025032:PAL-1_target_genes
WBPaper00025141:N2_Expressed_Genes
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_I
WBPaper00037695:LD_DD_6-day
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA100_up
WBPaper00040963:TA200_up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00044535:male_downregulated
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_5
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(122_min)
InteractionWBInteraction000245349
WBInteraction000336983
WBInteraction000374669
WBInteraction000387972
WBInteraction000472903
WBInteraction000473548
WBInteraction000521233
WBInteraction000536631
WBInteraction000536706
WBInteraction000547819
Map_infoPositivePositive_cloneT04G9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-19.5011
ReferenceWBPaper00038491
WBPaper00049531
WBPaper00055090
MethodGene