WormBase Tree Display for Gene: WBGene00020169
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| WBGene00020169 | SMap | S_parent | Sequence | T02G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mmaa-1 | Paper_evidence | WBPaper00027754 | |||||
| Sequence_name | T02G5.13 | ||||||||
| Molecular_name | T02G5.13a | ||||||||
| T02G5.13a.1 | |||||||||
| CE31822 | |||||||||
| T02G5.13b | |||||||||
| CE04865 | |||||||||
| T02G5.13b.1 | |||||||||
| T02G5.13b.2 | |||||||||
| Other_name | CELE_T02G5.13 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | mmaa-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Aug 2006 11:39:27 | WBPerson2970 | Name_change | CGC_name | mmaa-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mmaa | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00032611 | ||||||||
| WBStrain00036947 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074214 | ||||||||
| 00074215 | |||||||||
| 00074216 | |||||||||
| 00074217 | |||||||||
| 00074218 | |||||||||
| 00074219 | |||||||||
| 00074220 | |||||||||
| 00074221 | |||||||||
| 00124872 | |||||||||
| 00124873 | |||||||||
| Contained_in_operon | CEOP2288 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00014202 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable GTPase activity. Predicted to be located in cytoplasm. Used to study methylmalonic acidemia. Human ortholog(s) of this gene implicated in methylmalonic acidemia cblA type. Is an ortholog of human MMAA (metabolism of cobalamin associated A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:14749 | Homo sapiens | Paper_evidence | WBPaper00027754 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 19 Apr 2013 00:00:00 | ||||||||
| Potential_model | DOID:0060742 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18871) | |||||
| Models_disease_in_annotation | WBDOannot00000160 | ||||||||
| Molecular_info | Corresponding_CDS | T02G5.13a | |||||||
| T02G5.13b | |||||||||
| Corresponding_CDS_history | T02G5.13:wp84 | ||||||||
| T02G5.13:wp127 | |||||||||
| Corresponding_transcript | T02G5.13a.1 | ||||||||
| T02G5.13b.1 | |||||||||
| T02G5.13b.2 | |||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf223291 | ||||||||
| WBsf223292 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035066 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026166 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052224 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018033 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026165 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078224 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027452 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017099 | ||||||||
| Expr1038772 | |||||||||
| Expr1155855 | |||||||||
| Expr2013624 | |||||||||
| Expr2031858 | |||||||||
| Drives_construct | WBCnstr00025327 | ||||||||
| Construct_product | WBCnstr00025327 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | II | Position | 0.493742 | Error | 0.000225 | |||
| Positive | Positive_clone | T02G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027754 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00045654 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00049923 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
