WormBase Tree Display for Gene: WBGene00020164
expand all nodes | collapse all nodes | view schema
| WBGene00020164 | SMap | S_parent | Sequence | T02G5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T02G5.4 | ||||||||
| Molecular_name | T02G5.4 | |||||||||
| Other_name | CELE_T02G5.4 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T02G5.4 | |||||||||
| DB_info | Database | AceView | gene | 2H373 | ||||||
| WormQTL | gene | WBGene00020164 | ||||||||
| WormFlux | gene | WBGene00020164 | ||||||||
| NDB | locus_tag | CELE_T02G5.4 | ||||||||
| NCBI | gene | 187992 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 28 May 2013 16:18:41 | WBPerson615 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (35) | ||||||||||
| Strain | WBStrain00037346 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00148932 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00215382 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00129039 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00054254 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00099611 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00002183 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Structured_description | Automated_description | Enriched in germ line; intestine; and muscle cell based on RNA-seq and microarray studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including manganese chloride; D-glucose; and bisphenol S based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T02G5.4:wp227 | ||||||||
| T02G5.4:wp230 | ||||||||||
| Corresponding_pseudogene | T02G5.4 | |||||||||
| Other_sequence | JI168261.1 | |||||||||
| HG02281 | ||||||||||
| ES742581.1 | ||||||||||
| CBC01982_1 | ||||||||||
| CRC04894_1 | ||||||||||
| Associated_feature | WBsf657201 | |||||||||
| WBsf657793 | ||||||||||
| WBsf657794 | ||||||||||
| WBsf657795 | ||||||||||
| WBsf657796 | ||||||||||
| WBsf657797 | ||||||||||
| Experimental_info | Expr_pattern | Expr1010961 | ||||||||
| Expr1038768 | ||||||||||
| Expr1155860 | ||||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (124) | ||||||||||
| Interaction (94) | ||||||||||
| Map_info | Positive | Positive_clone | T02G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | 0.493298 | ||||||||
| Reference | WBPaper00026800 | |||||||||
| WBPaper00029292 | ||||||||||
| WBPaper00038491 | ||||||||||
| WBPaper00042257 | ||||||||||
| Method | Gene |
