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WormBase Tree Display for Gene: WBGene00020153

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Name Class

WBGene00020153SMapS_parentSequenceT01G6
IdentityVersion2
NameCGC_namenhr-212Person_evidenceWBPerson600
Sequence_nameT01G6.6
Molecular_nameT01G6.6a
T01G6.6a.1
CE35608
T01G6.6b
CE42457
T01G6.6b.1
Other_nameCELE_T01G6.6Accession_evidenceNDBBX284605
Public_namenhr-212
DB_infoDatabaseAceViewgene5A963
WormQTLgeneWBGene00020153
WormFluxgeneWBGene00020153
NDBlocus_tagCELE_T01G6.6
PanthergeneCAEEL|WormBase=WBGene00020153|UniProtKB=B1GRK7
familyPTHR45680
NCBIgene187964
RefSeqproteinNM_070816.5
NM_001129523.4
TrEMBLUniProtAccH2L0I0
B1GRK7
UniProt_GCRPUniProtAccB1GRK7
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-212
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (134)
RNASeq_FPKM (74)
GO_annotation00005591
00005592
00005593
00124862
00124863
00124864
00124865
Contained_in_operonCEOP5020
Ortholog (54)
Paralog (217)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST01G6.6a
T01G6.6b
Corresponding_CDS_historyT01G6.6:wp108
T01G6.6:wp188
Corresponding_transcriptT01G6.6a.1
T01G6.6b.1
Associated_featureWBsf646635
WBsf999171
WBsf999172
WBsf231338
Transcription_factorWBTranscriptionFactor000608
Experimental_infoRNAi_resultWBRNAi00052153Inferred_automaticallyRNAi_primary
WBRNAi00035028Inferred_automaticallyRNAi_primary
WBRNAi00017989Inferred_automaticallyRNAi_primary
Expr_patternExpr1026231
Expr1038764
Expr1155788
Expr2014116
Expr2032355
Drives_constructWBCnstr00025338
Construct_productWBCnstr00025338
Microarray_results (21)
Expression_cluster (129)
InteractionWBInteraction000320252
WBInteraction000453049
Map_infoMapVPosition-19.9885
PositivePositive_cloneT01G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5347
5367
4989
Pseudo_map_position
ReferenceWBPaper00027309
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene