WormBase Tree Display for Gene: WBGene00020153
expand all nodes | collapse all nodes | view schema
WBGene00020153 | SMap | S_parent | Sequence | T01G6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nhr-212 | Person_evidence | WBPerson600 | |||
Sequence_name | T01G6.6 | ||||||
Molecular_name | T01G6.6a | ||||||
T01G6.6a.1 | |||||||
CE35608 | |||||||
T01G6.6b | |||||||
CE42457 | |||||||
T01G6.6b.1 | |||||||
Other_name | CELE_T01G6.6 | Accession_evidence | NDB | BX284605 | |||
Public_name | nhr-212 | ||||||
DB_info | Database | AceView | gene | 5A963 | |||
WormQTL | gene | WBGene00020153 | |||||
WormFlux | gene | WBGene00020153 | |||||
NDB | locus_tag | CELE_T01G6.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020153|UniProtKB=B1GRK7 | |||||
family | PTHR45680 | ||||||
NCBI | gene | 187964 | |||||
RefSeq | protein | NM_070816.5 | |||||
NM_001129523.4 | |||||||
TrEMBL | UniProtAcc | H2L0I0 | |||||
B1GRK7 | |||||||
UniProt_GCRP | UniProtAcc | B1GRK7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (134) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005591 | ||||||
00005592 | |||||||
00005593 | |||||||
00124862 | |||||||
00124863 | |||||||
00124864 | |||||||
00124865 | |||||||
Contained_in_operon | CEOP5020 | ||||||
Ortholog (54) | |||||||
Paralog (217) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T01G6.6a | |||||
T01G6.6b | |||||||
Corresponding_CDS_history | T01G6.6:wp108 | ||||||
T01G6.6:wp188 | |||||||
Corresponding_transcript | T01G6.6a.1 | ||||||
T01G6.6b.1 | |||||||
Associated_feature | WBsf646635 | ||||||
WBsf999171 | |||||||
WBsf999172 | |||||||
WBsf231338 | |||||||
Transcription_factor | WBTranscriptionFactor000608 | ||||||
Experimental_info | RNAi_result | WBRNAi00052153 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035028 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017989 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026231 | ||||||
Expr1038764 | |||||||
Expr1155788 | |||||||
Expr2014116 | |||||||
Expr2032355 | |||||||
Drives_construct | WBCnstr00025338 | ||||||
Construct_product | WBCnstr00025338 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (129) | |||||||
Interaction | WBInteraction000320252 | ||||||
WBInteraction000453049 | |||||||
Map_info | Map | V | Position | -19.9885 | |||
Positive | Positive_clone | T01G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5347 | |||||
5367 | |||||||
4989 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |