WormBase Tree Display for Gene: WBGene00020135
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WBGene00020135 | SMap | S_parent | Sequence | T01B6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | aakg-4 | Person_evidence | WBPerson11446 | |||
Sequence_name | T01B6.3 | ||||||
Molecular_name (6) | |||||||
Other_name | CELE_T01B6.3 | Accession_evidence | NDB | BX284606 | |||
Public_name | aakg-4 | ||||||
DB_info | Database | AceView | gene | XC930 | |||
WormQTL | gene | WBGene00020135 | |||||
WormFlux | gene | WBGene00020135 | |||||
NDB | locus_tag | CELE_T01B6.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020135|UniProtKB=H2L0K0 | |||||
family | PTHR13780 | ||||||
NCBI | gene | 187928 | |||||
RefSeq | protein | NM_171633.7 | |||||
NM_171632.4 | |||||||
TREEFAM | TREEFAM_ID | TF313247 | |||||
TrEMBL | UniProtAcc | H2L0K0 | |||||
Q8MPT4 | |||||||
UniProt_GCRP | UniProtAcc | H2L0K0 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | aakg | ||||||
Allele (71) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00023136 | ||||||
00023137 | |||||||
00023138 | |||||||
00023139 | |||||||
00023140 | |||||||
00023141 | |||||||
Ortholog (30) | |||||||
Paralog | WBGene00011276 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00013732 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00021527 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020633 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Concise_description | aakg-4 encodes one of five C. elegans AMP kinase (AMPK) gamma regulatory subunits. | Paper_evidence | WBPaper00031352 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 09 Jul 2010 00:00:00 | ||||||
Automated_description | Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in monoatomic ion transport. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nucleotide-activated protein kinase complex. Expressed in several structures, including accessory cell; dorsal nerve cord; neurons; non-striated muscle; and preanal ganglion. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T01B6.3a | |||||
T01B6.3b | |||||||
Corresponding_CDS_history | T01B6.3a:wp98 | ||||||
T01B6.3b:wp98 | |||||||
Corresponding_transcript | T01B6.3a.1 | ||||||
T01B6.3b.1 | |||||||
Other_sequence | Dviv_isotig26865 | ||||||
Associated_feature (13) | |||||||
Experimental_info | RNAi_result | WBRNAi00052079 | Inferred_automatically | RNAi_primary | |||
WBRNAi00017937 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11586 | ||||||
Expr1012719 | |||||||
Expr1155710 | |||||||
Expr2009059 | |||||||
Expr2027295 | |||||||
Drives_construct | WBCnstr00018960 | ||||||
WBCnstr00025352 | |||||||
Construct_product | WBCnstr00025352 | ||||||
Microarray_results (27) | |||||||
Expression_cluster (194) | |||||||
Interaction (74) | |||||||
Map_info | Map | X | Position | -15.733 | Error | 0.0468 | |
Positive | Positive_clone | T01B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00044832 | ||||||
WBPaper00064229 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |