WormBase Tree Display for Gene: WBGene00020051
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| WBGene00020051 | SMap | S_parent | Sequence | R13A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mfsd-6 | Paper_evidence | WBPaper00051175 | |||||
| Person_evidence | WBPerson293 | ||||||||
| Sequence_name | R13A5.9 | ||||||||
| Molecular_name | R13A5.9 | ||||||||
| R13A5.9.1 | |||||||||
| CE01381 | |||||||||
| Other_name | CELE_R13A5.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mfsd-6 | ||||||||
| DB_info | Database | AceView | gene | 3I666 | |||||
| WormQTL | gene | WBGene00020051 | |||||||
| WormFlux | gene | WBGene00020051 | |||||||
| NDB | locus_tag | CELE_R13A5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020051|UniProtKB=Q95Y88 | |||||||
| family | PTHR16172 | ||||||||
| NCBI | gene | 176073 | |||||||
| RefSeq | protein | NM_066261.6 | |||||||
| TREEFAM | TREEFAM_ID | TF314366 | |||||||
| TrEMBL | UniProtAcc | Q95Y88 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y88 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 May 2017 10:42:18 | WBPerson2970 | Name_change | CGC_name | mfsd-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mfsd | ||||||||
| Allele (51) | |||||||||
| Strain | WBStrain00002242 | ||||||||
| WBStrain00002243 | |||||||||
| WBStrain00037476 | |||||||||
| WBStrain00051064 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089769 | ||||||||
| 00089770 | |||||||||
| 00089771 | |||||||||
| 00089772 | |||||||||
| 00089773 | |||||||||
| 00089774 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Acts upstream of or within with a positive effect on synaptic vesicle exocytosis. Located in synaptic vesicle. Is an ortholog of human MFSD6 (major facilitator superfamily domain containing 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R13A5.9 | |||||||
| Corresponding_transcript | R13A5.9.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf667089 | ||||||||
| WBsf716548 | |||||||||
| WBsf993045 | |||||||||
| WBsf993046 | |||||||||
| WBsf1015255 | |||||||||
| WBsf1015256 | |||||||||
| WBsf227004 | |||||||||
| WBsf227005 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005430 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034920 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051898 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001226 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095700 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002969 | ||||||||
| WBCnstr00002970 | |||||||||
| WBCnstr00004480 | |||||||||
| WBCnstr00020814 | |||||||||
| WBCnstr00025400 | |||||||||
| Construct_product | WBCnstr00020814 | ||||||||
| WBCnstr00025400 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (188) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | III | Position | -0.664155 | |||||
| Positive | Positive_clone | R13A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046944 | |||||||||
| WBPaper00050231 | |||||||||
| WBPaper00051175 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055785 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
