WormBase Tree Display for Gene: WBGene00020026
expand all nodes | collapse all nodes | view schema
| WBGene00020026 | SMap | S_parent | Sequence | R12C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R12C12.6 | |||||||
| Molecular_name | R12C12.6a | ||||||||
| R12C12.6a.1 | |||||||||
| CE02851 | |||||||||
| R12C12.6b | |||||||||
| CE39619 | |||||||||
| R12C12.6b.1 | |||||||||
| Other_name | CELE_R12C12.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | R12C12.6 | ||||||||
| DB_info | Database | AceView | gene | 2G336 | |||||
| WormQTL | gene | WBGene00020026 | |||||||
| WormFlux | gene | WBGene00020026 | |||||||
| NDB | locus_tag | CELE_R12C12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020026|UniProtKB=Q21960 | |||||||
| family | PTHR13064 | ||||||||
| NCBI | gene | 187840 | |||||||
| RefSeq | protein | NM_001047331.4 | |||||||
| NM_001047332.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF315146 | |||||||
| TrEMBL | UniProtAcc | Q2L6Y3 | |||||||
| Q21960 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21960 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| Strain | WBStrain00034958 | ||||||||
| WBStrain00047577 | |||||||||
| WBStrain00055208 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073505 | ||||||||
| 00124755 | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be located in lysosomal membrane. Expressed in excretory cell; hermaphrodite gonad; and rectal valve cell. Is an ortholog of human TMEM9B (TMEM9 domain family member B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R12C12.6a | |||||||
| R12C12.6b | |||||||||
| Corresponding_CDS_history | R12C12.6:wp153 | ||||||||
| Corresponding_transcript | R12C12.6a.1 | ||||||||
| R12C12.6b.1 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf650108 | ||||||||
| WBsf665585 | |||||||||
| WBsf223125 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017794 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051840 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2063 | ||||||||
| Expr2120 | |||||||||
| Expr1011187 | |||||||||
| Expr1038700 | |||||||||
| Expr1155501 | |||||||||
| Expr1200244 | |||||||||
| Expr2005611 | |||||||||
| Expr2023828 | |||||||||
| Drives_construct | WBCnstr00025422 | ||||||||
| Construct_product | WBCnstr00025422 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (76) | |||||||||
| Interaction | WBInteraction000188584 | ||||||||
| WBInteraction000209464 | |||||||||
| WBInteraction000238898 | |||||||||
| WBInteraction000249950 | |||||||||
| WBInteraction000262874 | |||||||||
| WBInteraction000331744 | |||||||||
| WBInteraction000383899 | |||||||||
| WBInteraction000419813 | |||||||||
| WBInteraction000440148 | |||||||||
| Map_info | Positive | Positive_clone | R12C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.601173 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
