WormBase Tree Display for Gene: WBGene00019763
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WBGene00019763 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | galt-1 | Paper_evidence | WBPaper00035404 | |||||
Person_evidence | WBPerson9999 | ||||||||
WBPerson250 | |||||||||
Sequence_name | M03F8.4 | ||||||||
Molecular_name | M03F8.4 | ||||||||
M03F8.4.1 | |||||||||
CE40769 | |||||||||
Other_name | CELE_M03F8.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | galt-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Nov 2009 10:01:13 | WBPerson9133 | Name_change | CGC_name | galt-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | galt | ||||||||
Allele (33) | |||||||||
Strain | WBStrain00004765 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (14) | |||||||||
Ortholog (28) | |||||||||
Paralog (27) | |||||||||
Structured_description | Concise_description | galt-1 encodes a galactosyltransferase that is a member of a novel glycosyltransferase family of proteins found in a wide variety of multicellular eukaryotes, but not in mammals; when expressed in insect calls, GALT-1 demonstrates manganese-dependent galactosyltransferase activity; loss of galt-1 activity results in animals that are resistant to the toxic effects of the fungal galectin CGL2 from the ink cap mushroom Coprinopsis cinerea. | Paper_evidence | WBPaper00035404 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 31 Oct 2009 00:00:00 | ||||||||
Automated_description | Enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity. Involved in N-glycan processing and protein galactosylation. Predicted to be located in cytoplasm. Expressed in coelomocyte and intestine. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M03F8.4 | |||||||
Corresponding_CDS_history | M03F8.4:wp171 | ||||||||
M03F8.4:wp172 | |||||||||
Corresponding_transcript | M03F8.4.1 | ||||||||
Other_sequence | Oden_isotig26282 | ||||||||
Associated_feature | WBsf646838 | ||||||||
WBsf646839 | |||||||||
WBsf661282 | |||||||||
WBsf661283 | |||||||||
WBsf231815 | |||||||||
Experimental_info | RNAi_result | WBRNAi00034414 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050884 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017167 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr12825 | ||||||||
Expr1020911 | |||||||||
Expr1038549 | |||||||||
Expr1154577 | |||||||||
Expr2011939 | |||||||||
Expr2030176 | |||||||||
Drives_construct | WBCnstr00005988 | ||||||||
WBCnstr00005989 | |||||||||
WBCnstr00025612 | |||||||||
Construct_product | WBCnstr00025612 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (141) | |||||||||
Interaction | WBInteraction000281947 | ||||||||
WBInteraction000412057 | |||||||||
WBInteraction000524299 | |||||||||
Map_info | Map | V | Position | -0.748593 | Error | 0.007505 | |||
Positive | Positive_clone | M03F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035404 | ||||||||
WBPaper00035585 | |||||||||
WBPaper00037859 | |||||||||
WBPaper00042476 | |||||||||
WBPaper00048269 | |||||||||
WBPaper00051834 | |||||||||
WBPaper00065080 | |||||||||
WBPaper00065106 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |