WormBase Tree Display for Gene: WBGene00019624
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| WBGene00019624 | SMap | S_parent | Sequence | K10C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | rnst-2 | Person_evidence | WBPerson26011 | |||||
| Sequence_name | K10C9.3 | ||||||||
| Molecular_name | K10C9.3 | ||||||||
| K10C9.3.1 | |||||||||
| CE28601 | |||||||||
| Other_name | CELE_K10C9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rnst-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Oct 2018 11:13:03 | WBPerson1983 | Name_change | CGC_name | rnst-2 | ||||
| 3 | 12 Nov 2018 16:28:50 | WBPerson1983 | Name_change | CGC_name | rnst-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnst | ||||||||
| Allele (184) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA endonuclease activity. Predicted to be involved in RNA catabolic process. Predicted to be located in extracellular region. Expressed in several structures, including intestine; neuronal sheath cell; pharynx; tail; and vulva. Human ortholog(s) of this gene implicated in several diseases, including RNASET2-deficient cystic leukoencephalopathy; adenocarcinoma (multiple); and mismatch repair cancer syndrome. Is an ortholog of human RNASET2 (ribonuclease T2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3883 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||
| DOID:234 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:0081007 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:0050861 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:3717 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:5410 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| DOID:0112182 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21686) | ||||||
| Molecular_info | Corresponding_CDS | K10C9.3 | |||||||
| Corresponding_transcript | K10C9.3.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf999247 | ||||||||
| WBsf1019127 | |||||||||
| WBsf231377 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000936 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050508 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016966 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034248 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13850 | ||||||||
| Expr1012890 | |||||||||
| Expr1038474 | |||||||||
| Expr1154219 | |||||||||
| Expr2005022 | |||||||||
| Expr2023241 | |||||||||
| Drives_construct | WBCnstr00025720 | ||||||||
| WBCnstr00040096 | |||||||||
| Construct_product | WBCnstr00025720 | ||||||||
| WBCnstr00040096 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction | WBInteraction000149860 | ||||||||
| WBInteraction000241298 | |||||||||
| WBInteraction000546251 | |||||||||
| WBInteraction000549405 | |||||||||
| WBInteraction000568276 | |||||||||
| WBInteraction000579531 | |||||||||
| Map_info | Map | V | Position | -19.8553 | |||||
| Positive | Positive_clone | K10C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055004 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058870 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00063730 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
