WormBase Tree Display for Gene: WBGene00019612
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| WBGene00019612 | SMap | S_parent | Sequence | K10B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gpcp-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | K10B3.6 | ||||||||
| Molecular_name | K10B3.6a | ||||||||
| K10B3.6a.1 | |||||||||
| CE46326 | |||||||||
| K10B3.6b | |||||||||
| CE46407 | |||||||||
| K10B3.6d | |||||||||
| CE46163 | |||||||||
| K10B3.6b.1 | |||||||||
| K10B3.6d.1 | |||||||||
| Other_name | CELE_K10B3.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gpcp-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Mar 2014 11:27:18 | WBPerson2970 | Name_change | CGC_name | gpcp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpcp | ||||||||
| Allele (73) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00071522 | ||||||||
| 00071523 | |||||||||
| 00071524 | |||||||||
| 00071525 | |||||||||
| 00071526 | |||||||||
| 00071527 | |||||||||
| 00124420 | |||||||||
| 00124421 | |||||||||
| 00124422 | |||||||||
| 00124423 | |||||||||
| Contained_in_operon | CEOPX036 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00011511 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | gpcp-1 encodes one of two C. elegans proteins orthologous to mammalian glycerophosphocholine phosphodiesterase (GPCPD1); by homology, GPCP-1 is predicted to catalyze the hydrolysis of glycero-3-phosphocholine to produce choline and glycerol 3-phosphate (EC=3.1.4.2). | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 23 Mar 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycerophosphocholine phosphodiesterase activity. Predicted to be involved in glycerophospholipid catabolic process. Is an ortholog of human GPCPD1 (glycerophosphocholine phosphodiesterase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K10B3.6a | |||||||
| K10B3.6b | |||||||||
| K10B3.6d | |||||||||
| Corresponding_CDS_history | K10B3.6a:wp227 | ||||||||
| K10B3.6b:wp227 | |||||||||
| K10B3.6c:wp227 | |||||||||
| K10B3.6c:wp274 | |||||||||
| Corresponding_transcript | K10B3.6a.1 | ||||||||
| K10B3.6b.1 | |||||||||
| K10B3.6d.1 | |||||||||
| Other_sequence | Dviv_isotig16490 | ||||||||
| Tcol_isotig17448 | |||||||||
| CJC15998_1 | |||||||||
| FC541926.1 | |||||||||
| Dviv_isotig16491 | |||||||||
| ACC02486_1 | |||||||||
| Associated_feature | WBsf670007 | ||||||||
| WBsf670281 | |||||||||
| WBsf1004522 | |||||||||
| WBsf1022569 | |||||||||
| WBsf237141 | |||||||||
| WBsf237142 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016950 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000956 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050479 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015896 | ||||||||
| Expr1038470 | |||||||||
| Expr1154189 | |||||||||
| Expr2012203 | |||||||||
| Expr2030439 | |||||||||
| Drives_construct | WBCnstr00025729 | ||||||||
| Construct_product | WBCnstr00025729 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction | WBInteraction000178665 | ||||||||
| WBInteraction000208937 | |||||||||
| WBInteraction000292770 | |||||||||
| WBInteraction000336073 | |||||||||
| WBInteraction000366558 | |||||||||
| WBInteraction000400135 | |||||||||
| WBInteraction000410141 | |||||||||
| WBInteraction000449195 | |||||||||
| WBInteraction000570115 | |||||||||
| Map_info | Positive | Positive_clone | K10B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -12.1596 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
