WormBase Tree Display for Gene: WBGene00019545
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| WBGene00019545 | SMap | S_parent | Sequence | K09B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K09B3.1 | |||||||
| Molecular_name | K09B3.1a | ||||||||
| K09B3.1a.1 | |||||||||
| CE31560 | |||||||||
| K09B3.1b | |||||||||
| CE48712 | |||||||||
| K09B3.1c | |||||||||
| CE49064 | |||||||||
| K09B3.1b.1 | |||||||||
| K09B3.1c.1 | |||||||||
| Other_name | CELE_K09B3.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | K09B3.1 | ||||||||
| DB_info | Database | AceView | gene | 4E561 | |||||
| WormQTL | gene | WBGene00019545 | |||||||
| WormFlux | gene | WBGene00019545 | |||||||
| NDB | locus_tag | CELE_K09B3.1 | |||||||
| NCBI | gene | 187188 | |||||||
| RefSeq | protein | NM_001380162.1 | |||||||
| NM_001307318.2 | |||||||||
| NM_068014.5 | |||||||||
| TrEMBL | UniProtAcc | U4PQR0 | |||||||
| Q94268 | |||||||||
| U4PDV0 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PQR0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Enriched in ABplpppapa; ABprpppapa; AFD; head mesodermal cell; and interfacial epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by Zidovudine; glycine; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09B3.1a | |||||||
| K09B3.1b | |||||||||
| K09B3.1c | |||||||||
| Corresponding_CDS_history | K09B3.1:wp82 | ||||||||
| Corresponding_transcript | K09B3.1a.1 | ||||||||
| K09B3.1b.1 | |||||||||
| K09B3.1c.1 | |||||||||
| Other_sequence | Name_isotig04294 | ||||||||
| NAC01975_1 | |||||||||
| BU087921.1 | |||||||||
| Associated_feature | WBsf645885 | ||||||||
| WBsf228124 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034185 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050377 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026040 | ||||||||
| Expr1154082 | |||||||||
| Expr2004955 | |||||||||
| Expr2023177 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000438765 | ||||||||
| Map_info | Positive | Positive_clone | K09B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -2.22412 | |||||||
| Method | Gene |
