WormBase Tree Display for Gene: WBGene00019460
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| WBGene00019460 | SMap | S_parent | Sequence | K06H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idi-1 | Person_evidence | WBPerson252 | |||||
| Sequence_name | K06H7.9 | ||||||||
| Molecular_name | K06H7.9 | ||||||||
| K06H7.9.1 | |||||||||
| CE26944 | |||||||||
| Other_name | CELE_K06H7.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | idi-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jul 2004 15:29:58 | WBPerson1971 | Name_change | CGC_name | idi-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idi | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00018546 | ||||||||
| 00018547 | |||||||||
| 00018548 | |||||||||
| 00018549 | |||||||||
| 00018550 | |||||||||
| 00018551 | |||||||||
| 00018552 | |||||||||
| 00018553 | |||||||||
| 00124295 | |||||||||
| 00124296 | |||||||||
| Contained_in_operon | CEOP3480 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Concise_description | idi-1 encodes an isopentyl-diphosphate isomerase that, by sequence similarity, is predicted to function in the synthesis of lipophilic molecules; in C. elegans, idi-1 activity is required for larval growth, movement and development and for removal of apoptotic cell corpses produced by the normal course of programmed cell death; in addition, idi-1 is required for normal morphology and size of vesicular organelles such as lysosomes and autophagosomes, suggesting that IDI-1 activity is essential for proper membrane dynamics. | Paper_evidence | WBPaper00025162 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 21 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable isopentenyl-diphosphate delta-isomerase activity. Predicted to be involved in isopentenyl diphosphate biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human IDI2 (isopentenyl-diphosphate delta isomerase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06H7.9 | |||||||
| Corresponding_transcript | K06H7.9.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf225344 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00050081 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016884 | ||||||||
| Expr1038405 | |||||||||
| Expr1153779 | |||||||||
| Expr2012675 | |||||||||
| Expr2030911 | |||||||||
| Drives_construct | WBCnstr00025820 | ||||||||
| Construct_product | WBCnstr00025820 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | III | Position | -0.377514 | Error | 0.000893 | |||
| Positive | Positive_clone | K06H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5644 | |||||||
| 5311 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025162 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
