WormBase Tree Display for Gene: WBGene00019380
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| WBGene00019380 | SMap | S_parent | Sequence | K04C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K04C2.2 | |||||||
| Molecular_name | K04C2.2 | ||||||||
| K04C2.2.1 | |||||||||
| CE00722 | |||||||||
| Other_name | K04C2.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_K04C2.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | K04C2.2 | ||||||||
| DB_info | Database | AceView | gene | 3H983 | |||||
| WormQTL | gene | WBGene00019380 | |||||||
| WormFlux | gene | WBGene00019380 | |||||||
| NDB | locus_tag | CELE_K04C2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019380|UniProtKB=Q21210 | |||||||
| family | PTHR13213 | ||||||||
| NCBI | gene | 175960 | |||||||
| RefSeq | protein | NM_066098.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317401 | |||||||
| TrEMBL | UniProtAcc | Q21210 | |||||||
| UniProt_GCRP | UniProtAcc | Q21210 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (82) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070677 | ||||||||
| 00070678 | |||||||||
| 00070679 | |||||||||
| 00070680 | |||||||||
| 00124245 | |||||||||
| 00124246 | |||||||||
| 00124247 | |||||||||
| 00124248 | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Predicted to enable sequence-specific DNA binding activity and transcription corepressor activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be located in nucleolus. Is an ortholog of human MYBBP1A (MYB binding protein 1a). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K04C2.2 | |||||||
| Corresponding_transcript | K04C2.2.1 | ||||||||
| Other_sequence | CR06000 | ||||||||
| CJC16984_1 | |||||||||
| CSC02344_1 | |||||||||
| FD514667.1 | |||||||||
| CJC10952_1 | |||||||||
| CRC03750_1 | |||||||||
| CBC10076_1 | |||||||||
| CBC16988_1 | |||||||||
| Associated_feature | WBsf645299 | ||||||||
| WBsf225165 | |||||||||
| WBsf225166 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1022338 | ||||||||
| Expr1038370 | |||||||||
| Expr1153593 | |||||||||
| Expr2004759 | |||||||||
| Expr2022983 | |||||||||
| Drives_construct | WBCnstr00025877 | ||||||||
| Construct_product | WBCnstr00025877 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (70) | |||||||||
| Map_info | Positive | Positive_clone | K04C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.907512 | |||||||
| Reference | WBPaper00024200 | ||||||||
| WBPaper00028451 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040135 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
