WormBase Tree Display for Gene: WBGene00019285

WBGene00019285 SMap: S_parent: Sequence: K01A2
  Identity: Version: 2
    Name: CGC_name: cbn-1
      Sequence_name: K01A2.11
      Molecular_name: K01A2.11a
        K01A2.11a.1
        CE35985
        K01A2.11b
        CE19521
        K01A2.11d
        CE38387
        K01A2.11b.1
        K01A2.11c
        K01A2.11d.1
      Other_name: CELE_K01A2.11 Accession_evidence: NDB BX284602
      Public_name: cbn-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 Jul 2004 15:44:18 WBPerson1971 Name_change: CGC_name: cbn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cbn
    Allele (109)
    Strain: WBStrain00033293
    RNASeq_FPKM (74)
    GO_annotation: 00124168
    Ortholog: WBGene00029224 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064708 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00146311 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135731 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00099836 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00159238 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00224976 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7173 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6764 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21313 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18320 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17505 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25609 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g876 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8425 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24377 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22511 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_11529.g23298 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_16517.g25387 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cbn-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5604 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5605 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00467.g11757 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14342 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008141 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08198 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11363 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20002300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3092 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245704 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259282 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (16)
    Structured_description: Concise_description: cbn-1 encodes a protein that contains a predicted signal peptide and calcium-binding EF-hand motifs. Curator_confirmed: WBPerson1843
          Date_last_updated: 07 Dec 2007 00:00:00
      Automated_description: Predicted to enable calcium ion binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K01A2.11a
      K01A2.11b
      K01A2.11d
    Corresponding_CDS_history: K01A2.11a:wp112
      K01A2.11c:wp248
    Corresponding_transcript: K01A2.11c
      K01A2.11a.1
      K01A2.11b.1
      K01A2.11d.1
    Other_sequence (17)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00076531 Inferred_automatically: RNAi_primary
      WBRNAi00016367 Inferred_automatically: RNAi_primary
      WBRNAi00049586 Inferred_automatically: RNAi_primary
      WBRNAi00115899 Inferred_automatically: RNAi_primary
      WBRNAi00033803 Inferred_automatically: RNAi_primary
      WBRNAi00001526 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027074
      Expr1038335
      Expr1153313
      Expr2009741
      Expr2027981
    Drives_construct: WBCnstr00025945
    Construct_product: WBCnstr00025945
    Microarray_results (36)
    Expression_cluster (222)
  Map_info: Map: II Position: -15.6229 Error: 0.000884
    Positive: Positive_clone: K01A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025051
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene