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WormBase Tree Display for Gene: WBGene00019268

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Name Class

WBGene00019268SMapS_parentSequenceH41C03
IdentityVersion1
NameSequence_nameH41C03.1
Molecular_nameH41C03.1
H41C03.1.1
CE19507
Other_nameCELE_H41C03.1Accession_evidenceNDBBX284602
Public_nameH41C03.1
DB_infoDatabaseAceViewgene2G147
WormQTLgeneWBGene00019268
WormFluxgeneWBGene00019268
NDBlocus_tagCELE_H41C03.1
PanthergeneCAEEL|WormBase=WBGene00019268|UniProtKB=O76636
familyPTHR47159
NCBIgene173994
RefSeqproteinNM_062767.5
TREEFAMTREEFAM_IDTF313988
TrEMBLUniProtAccO76636
UniProt_GCRPUniProtAccO76636
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (72)
RNASeq_FPKM (74)
Ortholog (26)
Paralog (11)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABarpaapap; ABarpaappa; anterior hypodermis; mechanosensory neurons; and rectal epithelial cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including bisphenol A; TPEN; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: CRAL/TRIO domain; CRAL-TRIO lipid binding domain; CRAL/TRIO, N-terminal domain superfamily; and CRAL-TRIO lipid binding domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH41C03.1
Corresponding_transcriptH41C03.1.1
Other_sequence (60)
Associated_featureWBsf654868
WBsf1012269
WBsf221353
WBsf221354
Experimental_infoRNAi_result (13)
Expr_patternExpr1016935
Expr1038323
Expr1153283
Expr2004615
Expr2022841
Drives_constructWBCnstr00025955
Construct_productWBCnstr00025955
Microarray_resultsSMD_H41C03.1
185591_at
A_12_P108583
Aff_H41C03.1
GPL13394_WBGene00019268
GPL13914_H41C03.1
GPL14144_H41C03.1_1088-1147_0.962_1_A
GPL14144_H41C03.1_766-825_0.927_11_C
GPL14144_H41C03.1_879-938_0.941_7_B
GPL19516_CGZ0027026
GPL21109_H41C03.1
GPL3518_CE19507
GPL8304_CE_WBGene00019268_A
GPL8304_CE_WBGene00019268_B
GPL8673_H41C03_1P00466
GPL8673_H41C03_1P00801
GPL8673_H41C03_1P01041
GPL9450_H41C03.1
cea2.p.41971
Expression_clusterWBPaper00027339:daf-12(rh273)_downregulated
WBPaper00031040:Cluster_5
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046024:sleep_downregulated_oscillating
WBPaper00046337:monosomal_N2_vs_daf-2_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049954:BPA_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:seam_expressed
WBPaper00051311:VGLN-1-interacting
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00051498:zinc-reduction_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056039:efa-6(tm3124)_downregulated
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00056617:adr-2_upregulated_L4_transcript
WBPaper00056826:SGP_biased
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058927:high-redox-state_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060445:ikb-1(nr2027)_downregulated_L1
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:B_F_K_Kp_U_Y
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061340:hyp7_AB_lineage
WBPaper00061340:hyp7_C_lineage
WBPaper00061340:P_cell
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:mlt-9_22518-F33D4.6_14044
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062715:blmp-1(s71)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:0_0
WBPaper00065841:33_1
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_21
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031850:mdt-15(RNAi)_upregulated
WBPaper00032948:StarveUp3
WBPaper00034739:N2lessDR1350
WBPaper00034757:down_by_oxidative_stress
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_C
WBPaper00036383:ash-2_L3_regulated
WBPaper00038172:aak-2overexpression_down_regulated
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
[cgc6390]:Cluster_A
InteractionWBInteraction000276408
WBInteraction000310119
WBInteraction000357866
WBInteraction000406747
WBInteraction000454178
WBInteraction000552687
WBInteraction000553652
WBInteraction000568093
Map_infoPositivePositive_cloneH41C03Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-0.863782
ReferenceWBPaper00055090
MethodGene