WormBase Tree Display for Gene: WBGene00019240
expand all nodes | collapse all nodes | view schema
| WBGene00019240 | SMap | S_parent | Sequence | H24K24 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | adh-5 | |||||||
| Sequence_name | H24K24.3 | ||||||||
| Molecular_name | H24K24.3a | ||||||||
| H24K24.3a.1 | |||||||||
| CE23822 | |||||||||
| H24K24.3b | |||||||||
| CE29978 | |||||||||
| H24K24.3b.1 | |||||||||
| Other_name | CELE_H24K24.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | adh-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Mar 2020 18:12:30 | WBPerson1983 | Name_change | CGC_name | adh-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | adh | ||||||||
| Allele (154) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Contained_in_operon | CEOP5024 | ||||||||
| Ortholog (52) | |||||||||
| Paralog | WBGene00021747 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WBGene00009554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010790 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010791 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010911 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011003 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011004 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012375 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012970 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00014096 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017060 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044305 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable S-(hydroxymethyl)glutathione dehydrogenase activity; alcohol dehydrogenase activity, zinc-dependent; and zinc ion binding activity. Predicted to be involved in formaldehyde catabolic process. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in several diseases, including AMED syndrome; alcohol use disorder; and late onset Parkinson's disease. Is an ortholog of human ADH5 (alcohol dehydrogenase 5 (class III), chi polypeptide). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:253) | ||||
| DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:253) | ||||||
| DOID:0060892 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:251) | ||||||
| DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:251) | ||||||
| DOID:0050741 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:250,HGNC:251,HGNC:252) | ||||||
| Molecular_info | Corresponding_CDS | H24K24.3a | |||||||
| H24K24.3b | |||||||||
| Corresponding_CDS_history | H24K24.3c:wp141 | ||||||||
| Corresponding_transcript | H24K24.3a.1 | ||||||||
| H24K24.3b.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf977481 | ||||||||
| WBsf977482 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020830 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057078 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016310 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033748 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013742 | ||||||||
| Expr1038308 | |||||||||
| Expr1153202 | |||||||||
| Expr2004580 | |||||||||
| Expr2022805 | |||||||||
| Drives_construct | WBCnstr00025975 | ||||||||
| Construct_product | WBCnstr00025975 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Positive | Positive_clone | H24K24 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.9381 | |||||||
| Reference | WBPaper00002192 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00054201 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062865 | |||||||||
| WBPaper00063976 | |||||||||
| Method | Gene |
