WormBase Tree Display for Gene: WBGene00019225
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| WBGene00019225 | SMap | S_parent | Sequence | H22K11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bgal-2 | Person_evidence | WBPerson105 | |||||
| Sequence_name | H22K11.2 | ||||||||
| Molecular_name | H22K11.2 | ||||||||
| H22K11.2.1 | |||||||||
| CE47186 | |||||||||
| Other_name | CELE_H22K11.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | bgal-2 | ||||||||
| DB_info | Database | AceView | gene | XH405 | |||||
| WormQTL | gene | WBGene00019225 | |||||||
| WormFlux | gene | WBGene00019225 | |||||||
| NDB | locus_tag | CELE_H22K11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019225|UniProtKB=O76632 | |||||||
| family | PTHR23421 | ||||||||
| NCBI | gene | 180945 | |||||||
| RefSeq | protein | NM_076739.7 | |||||||
| TREEFAM | TREEFAM_ID | TF314816 | |||||||
| TrEMBL | UniProtAcc | O76632 | |||||||
| UniProt_GCRP | UniProtAcc | O76632 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Sep 2014 10:29:23 | WBPerson2970 | Name_change | CGC_name | bgal-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bgal | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00032889 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038581 | ||||||||
| 00038582 | |||||||||
| 00038583 | |||||||||
| 00038584 | |||||||||
| 00038585 | |||||||||
| 00124120 | |||||||||
| 00124121 | |||||||||
| 00124122 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00011832 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable beta-galactosidase activity. Predicted to be involved in carbohydrate metabolic process. Predicted to be located in vacuole. Is an ortholog of human GLB1L (galactosidase beta 1 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H22K11.2 | |||||||
| Corresponding_CDS_history | H22K11.2:wp230 | ||||||||
| Corresponding_transcript | H22K11.2.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf648260 | ||||||||
| WBsf235867 | |||||||||
| WBsf235868 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049456 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008929 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017827 | ||||||||
| Expr1153184 | |||||||||
| Expr2009618 | |||||||||
| Expr2027856 | |||||||||
| Drives_construct | WBCnstr00025984 | ||||||||
| Construct_product | WBCnstr00025984 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | -2.4332 | |||||
| Positive | Positive_clone | H22K11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062625 | |||||||||
| WBPaper00065937 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
