WormBase Tree Display for Gene: WBGene00019163
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WBGene00019163 | SMap | S_parent | Sequence | H06H21 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ubxn | ||||||
Allele (36) | |||||||
Strain | WBStrain00003521 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00085376 | ||||||
00085377 | |||||||
00085378 | |||||||
Contained_in_operon | CEOP4152 | ||||||
CEOP5608 | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00007100 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | ubxn-6 encodes one of six C. elegans UBX (ubiquitin regulatory X) domain-containing proteins. | Paper_evidence | WBPaper00029386 | |||
WBPaper00037734 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 05 Apr 2011 00:00:00 | ||||||
Automated_description | Predicted to be located in cytoplasm. Expressed in pharynx. Is an ortholog of human UBXN6 (UBX domain protein 6). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | H06H21.6 | |||||
Corresponding_CDS_history | H06H21.6:wp97 | ||||||
H06H21.6a:wp264 | |||||||
H06H21.6b:wp264 | |||||||
Corresponding_transcript | H06H21.6.1 | ||||||
Associated_feature | WBsf230024 | ||||||
Experimental_info | RNAi_result | WBRNAi00049314 | Inferred_automatically | RNAi_primary | |||
WBRNAi00062292 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016208 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049313 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033670 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078147 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4671 | ||||||
Expr4677 | |||||||
Expr6273 | |||||||
Expr1025316 | |||||||
Expr1038275 | |||||||
Expr1153059 | |||||||
Expr2017734 | |||||||
Expr2035873 | |||||||
Drives_construct | WBCnstr00003979 | ||||||
WBCnstr00012165 | |||||||
WBCnstr00026018 | |||||||
Construct_product | WBCnstr00012165 | ||||||
WBCnstr00026018 | |||||||
Antibody | WBAntibody00002858 | ||||||
Microarray_results (31) | |||||||
Expression_cluster (96) | |||||||
Interaction (76) | |||||||
Map_info | Map | IV | Position | 1.28692 | Error | 0.004576 | |
Positive | Positive_clone | H06H21 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00029386 | ||||||
WBPaper00037734 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00055951 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |