WormBase Tree Display for Gene: WBGene00019162
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| WBGene00019162 | SMap | S_parent | Sequence | H06H21 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eif-1.A | Person_evidence | WBPerson1787 | |||||
| Sequence_name | H06H21.3 | ||||||||
| Molecular_name | H06H21.3 | ||||||||
| H06H21.3.1 | |||||||||
| CE17962 | |||||||||
| Other_name | CELE_H06H21.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | eif-1.A | ||||||||
| DB_info | Database | AceView | gene | 4F575 | |||||
| WormQTL | gene | WBGene00019162 | |||||||
| WormFlux | gene | WBGene00019162 | |||||||
| NDB | locus_tag | CELE_H06H21.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019162|UniProtKB=Q9TXU7 | |||||||
| family | PTHR21668 | ||||||||
| NCBI | gene | 177254 | |||||||
| RefSeq | protein | NM_068249.7 | |||||||
| TREEFAM | TREEFAM_ID | TF350394 | |||||||
| TrEMBL | UniProtAcc | Q9TXU7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXU7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jan 2010 16:20:10 | WBPerson2970 | Name_change | CGC_name | eif-1.A | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00003073 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (59) | |||||||||
| Structured_description | Concise_description | eif-1.A encodes a homolog of eukaryotic translation initiation factor 1A; eif-1.A is widely expressed and, by homology, is predicted to function in translation initiation. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 29 Jan 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytoplasm. Expressed in head and tail. Is an ortholog of human EIF1AX (eukaryotic translation initiation factor 1A X-linked) and EIF1AY (eukaryotic translation initiation factor 1A Y-linked). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H06H21.3 | |||||||
| Corresponding_transcript | H06H21.3.1 | ||||||||
| Other_sequence (92) | |||||||||
| Associated_feature | WBsf655019 | ||||||||
| WBsf981754 | |||||||||
| WBsf996397 | |||||||||
| WBsf996398 | |||||||||
| WBsf1017315 | |||||||||
| WBsf1017316 | |||||||||
| WBsf228239 | |||||||||
| Experimental_info | RNAi_result (37) | ||||||||
| Expr_pattern | Chronogram1863 | ||||||||
| Expr6272 | |||||||||
| Expr1028890 | |||||||||
| Expr1038274 | |||||||||
| Expr1153057 | |||||||||
| Expr2011240 | |||||||||
| Expr2029476 | |||||||||
| Drives_construct | WBCnstr00003565 | ||||||||
| WBCnstr00026019 | |||||||||
| WBCnstr00040400 | |||||||||
| Construct_product | WBCnstr00003565 | ||||||||
| WBCnstr00026019 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (160) | |||||||||
| Map_info | Map | IV | Position | 1.29758 | Error | 0.004402 | |||
| Positive | Positive_clone | H06H21 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041831 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056095 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
