WormBase Tree Display for Gene: WBGene00018971
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WBGene00018971 | SMap | S_parent | Sequence | F56D6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-67 | Person_evidence | WBPerson261 | |||||
WBPerson655 | |||||||||
Sequence_name | F56D6.2 | ||||||||
Molecular_name | F56D6.2 | ||||||||
F56D6.2.1 | |||||||||
CE31546 | |||||||||
F56D6.2.2 | |||||||||
Other_name | CELE_F56D6.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | clec-67 | ||||||||
DB_info | Database | AceView | gene | 4E687 | |||||
WormQTL | gene | WBGene00018971 | |||||||
WormFlux | gene | WBGene00018971 | |||||||
NDB | locus_tag | CELE_F56D6.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 177151 | |||||||
RefSeq | protein | NM_068036.7 | |||||||
TREEFAM | TREEFAM_ID | TF317818 | |||||||
TrEMBL | UniProtAcc | Q8ITX4 | |||||||
UniProt_GCRP | UniProtAcc | Q8ITX4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-67 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (51) | |||||||||
Strain | WBStrain00032778 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00105832 | ||||||||
Ortholog (22) | |||||||||
Paralog (45) | |||||||||
Structured_description | Concise_description | clec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor. | Paper_evidence (2) | ||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 19 Feb 2014 00:00:00 | ||||||||
Automated_description | Involved in PERK-mediated unfolded protein response. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56D6.2 | |||||||
Corresponding_CDS_history | F56D6.2:wp82 | ||||||||
Corresponding_transcript | F56D6.2.1 | ||||||||
F56D6.2.2 | |||||||||
Other_sequence | JI459262.1 | ||||||||
Associated_feature | WBsf645894 | ||||||||
WBsf228136 | |||||||||
WBsf228137 | |||||||||
WBsf228138 | |||||||||
WBsf228139 | |||||||||
Experimental_info | RNAi_result | WBRNAi00020639 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032963 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048721 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1000 | ||||||||
Expr4512 | |||||||||
Expr1038189 | |||||||||
Expr1152473 | |||||||||
Expr2010200 | |||||||||
Expr2028441 | |||||||||
Drives_construct | WBCnstr00012070 | ||||||||
WBCnstr00026155 | |||||||||
Construct_product | WBCnstr00026155 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (346) | |||||||||
Interaction (19) | |||||||||
WBProcess (2) | |||||||||
Map_info | Map | IV | Position | -1.69011 | Error | 0.017302 | |||
Positive | Positive_clone | F56D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |