WormBase Tree Display for Gene: WBGene00018971
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| WBGene00018971 | SMap | S_parent | Sequence | F56D6 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | clec | ||||||
| Allele (51) | |||||||
| Strain | WBStrain00032778 | ||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00105832 | ||||||
| Ortholog (22) | |||||||
| Paralog (45) | |||||||
| Structured_description | Concise_description | clec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028945 | |||
| WBPaper00041211 | |||||||
| Curator_confirmed | WBPerson1843 | ||||||
| Date_last_updated | 19 Feb 2014 00:00:00 | ||||||
| Automated_description | Involved in PERK-mediated unfolded protein response. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | F56D6.2 | |||||
| Corresponding_CDS_history | F56D6.2:wp82 | ||||||
| Corresponding_transcript | F56D6.2.1 | ||||||
| F56D6.2.2 | |||||||
| Other_sequence | JI459262.1 | ||||||
| Associated_feature | WBsf645894 | ||||||
| WBsf228136 | |||||||
| WBsf228137 | |||||||
| WBsf228138 | |||||||
| WBsf228139 | |||||||
| Experimental_info | RNAi_result | WBRNAi00020639 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00032963 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048721 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1000 | ||||||
| Expr4512 | |||||||
| Expr1038189 | |||||||
| Expr1152473 | |||||||
| Expr2010200 | |||||||
| Expr2028441 | |||||||
| Drives_construct | WBCnstr00012070 | ||||||
| WBCnstr00026155 | |||||||
| Construct_product | WBCnstr00026155 | ||||||
| Microarray_results (17) | |||||||
| Expression_cluster (346) | |||||||
| Interaction (19) | |||||||
| WBProcess | WBbiopr:00000039 | ||||||
| WBbiopr:00000092 | |||||||
| Map_info | Map | IV | Position | -1.69011 | Error | 0.017302 | |
| Positive | Positive_clone | F56D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference (12) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
