WormBase Tree Display for Gene: WBGene00018971
expand all nodes | collapse all nodes | view schema
WBGene00018971 | SMap | S_parent | Sequence | F56D6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-67 | Person_evidence | WBPerson261 | |||
WBPerson655 | |||||||
Sequence_name | F56D6.2 | ||||||
Molecular_name | F56D6.2 | ||||||
F56D6.2.1 | |||||||
CE31546 | |||||||
F56D6.2.2 | |||||||
Other_name | CELE_F56D6.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | clec-67 | ||||||
DB_info | Database | AceView | gene | 4E687 | |||
WormQTL | gene | WBGene00018971 | |||||
WormFlux | gene | WBGene00018971 | |||||
NDB | locus_tag | CELE_F56D6.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4 | |||||
family | PTHR23062 | ||||||
NCBI | gene | 177151 | |||||
RefSeq | protein | NM_068036.7 | |||||
TREEFAM | TREEFAM_ID | TF317818 | |||||
TrEMBL | UniProtAcc | Q8ITX4 | |||||
UniProt_GCRP | UniProtAcc | Q8ITX4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (51) | |||||||
Strain | WBStrain00032778 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00105832 | ||||||
Ortholog (22) | |||||||
Paralog (45) | |||||||
Structured_description | Concise_description | clec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028945 | |||
WBPaper00041211 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 19 Feb 2014 00:00:00 | ||||||
Automated_description | Involved in PERK-mediated unfolded protein response. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F56D6.2 | |||||
Corresponding_CDS_history | F56D6.2:wp82 | ||||||
Corresponding_transcript (2) | |||||||
Other_sequence | JI459262.1 | ||||||
Associated_feature | WBsf645894 | ||||||
WBsf228136 | |||||||
WBsf228137 | |||||||
WBsf228138 | |||||||
WBsf228139 | |||||||
Experimental_info | RNAi_result | WBRNAi00020639 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032963 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048721 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1000 | ||||||
Expr4512 | |||||||
Expr1038189 | |||||||
Expr1152473 | |||||||
Expr2010200 | |||||||
Expr2028441 | |||||||
Drives_construct | WBCnstr00012070 | ||||||
WBCnstr00026155 | |||||||
Construct_product | WBCnstr00026155 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (346) | |||||||
Interaction (19) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
WBbiopr:00000092 | |||||||
Map_info | Map | IV | Position | -1.69011 | Error | 0.017302 | |
Positive | Positive_clone | F56D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |