WormBase Tree Display for Gene: WBGene00018971

WBGene00018971 SMap: S_parent: Sequence: F56D6
  Identity: Version: 2
    Name: CGC_name: clec-67 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: F56D6.2
      Molecular_name: F56D6.2
        F56D6.2.1
        CE31546
        F56D6.2.2
      Other_name: CELE_F56D6.2 Accession_evidence: NDB BX284604
      Public_name: clec-67
    DB_info: Database: AceView gene 4E687
        WormQTL gene WBGene00018971
        WormFlux gene WBGene00018971
        NDB locus_tag CELE_F56D6.2
        Panther gene CAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4
          family PTHR23062
        NCBI gene 177151
        RefSeq protein NM_068036.7
        TREEFAM TREEFAM_ID TF317818
        TrEMBL UniProtAcc Q8ITX4
        UniProt_GCRP UniProtAcc Q8ITX4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-67
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (51)
    Strain: WBStrain00032778
    RNASeq_FPKM (74)
    GO_annotation: 00105832
    Ortholog: WBGene00063662 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      WBGene00023668 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00025257 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035982 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00035983 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035984 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00040177 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00042755 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00068515 Caenorhabditis remanei From_analysis: OMA
      WBGene00056613 Caenorhabditis remanei From_analysis: OMA
      WBGene00079518 Caenorhabditis remanei From_analysis: OMA
      WBGene00149851 Caenorhabditis brenneri From_analysis: OMA
      WBGene00160672 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00067572 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00157026 Caenorhabditis brenneri From_analysis: Inparanoid_8
      CBOVI.g11167 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9529 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP31.g19741 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15733 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4142 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00447.g10960 Caenorhabditis angaria From_analysis: WormBase-Compara
      chrIV_pilon.g10068 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (45)
    Structured_description: Concise_description: clec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor. Paper_evidence: WBPaper00028945
            WBPaper00041211
          Curator_confirmed: WBPerson1843
          Date_last_updated: 19 Feb 2014 00:00:00
      Automated_description: Involved in PERK-mediated unfolded protein response. Expressed in intestine. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56D6.2
    Corresponding_CDS_history: F56D6.2:wp82
    Corresponding_transcript: F56D6.2.1
      F56D6.2.2
    Other_sequence: JI459262.1
    Associated_feature: WBsf645894
      WBsf228136
      WBsf228137
      WBsf228138
      WBsf228139
  Experimental_info: RNAi_result: WBRNAi00020639 Inferred_automatically: RNAi_primary
      WBRNAi00032963 Inferred_automatically: RNAi_primary
      WBRNAi00048721 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1000
      Expr4512
      Expr1038189
      Expr1152473
      Expr2010200
      Expr2028441
    Drives_construct: WBCnstr00012070
      WBCnstr00026155
    Construct_product: WBCnstr00026155
    Microarray_results (17)
    Expression_cluster (346)
    Interaction (19)
    WBProcess: WBbiopr:00000039
      WBbiopr:00000092
  Map_info: Map: IV Position: -1.69011 Error: 0.017302
    Positive: Positive_clone: F56D6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene