WormBase Tree Display for Gene: WBGene00018971
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| WBGene00018971 | SMap | S_parent | Sequence | F56D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-67 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | F56D6.2 | ||||||||
| Molecular_name | F56D6.2 | ||||||||
| F56D6.2.1 | |||||||||
| CE31546 | |||||||||
| F56D6.2.2 | |||||||||
| Other_name | CELE_F56D6.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-67 | ||||||||
| DB_info | Database | AceView | gene | 4E687 | |||||
| WormQTL | gene | WBGene00018971 | |||||||
| WormFlux | gene | WBGene00018971 | |||||||
| NDB | locus_tag | CELE_F56D6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 177151 | |||||||
| RefSeq | protein | NM_068036.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | Q8ITX4 | |||||||
| UniProt_GCRP | UniProtAcc | Q8ITX4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-67 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele | WBVar01649621 | ||||||||
| WBVar01649622 | |||||||||
| WBVar01668652 | |||||||||
| WBVar01451961 | |||||||||
| WBVar01451962 | |||||||||
| WBVar01451963 | |||||||||
| WBVar01451964 | |||||||||
| WBVar02020457 | |||||||||
| WBVar01803704 | |||||||||
| WBVar00093868 | |||||||||
| WBVar01657254 | |||||||||
| WBVar00422283 | |||||||||
| WBVar00422284 | |||||||||
| WBVar00188006 | |||||||||
| WBVar00188007 | |||||||||
| WBVar00188008 | |||||||||
| WBVar00313246 | |||||||||
| WBVar00571747 | |||||||||
| WBVar01515306 | |||||||||
| WBVar01515307 | |||||||||
| WBVar01499790 | |||||||||
| WBVar02147964 | |||||||||
| WBVar01499633 | |||||||||
| WBVar02119991 | |||||||||
| WBVar00901629 | |||||||||
| WBVar00901630 | |||||||||
| WBVar00901631 | |||||||||
| WBVar02122951 | |||||||||
| WBVar00901632 | |||||||||
| WBVar00901633 | |||||||||
| WBVar00901634 | |||||||||
| WBVar00901635 | |||||||||
| WBVar00901636 | |||||||||
| WBVar02122588 | |||||||||
| WBVar00901637 | |||||||||
| WBVar00901638 | |||||||||
| WBVar00901639 | |||||||||
| WBVar00901640 | |||||||||
| WBVar00901641 | |||||||||
| WBVar00901642 | |||||||||
| WBVar00901643 | |||||||||
| WBVar00901644 | |||||||||
| WBVar00901645 | |||||||||
| WBVar00901646 | |||||||||
| WBVar00901647 | |||||||||
| WBVar00901648 | |||||||||
| WBVar02148208 | |||||||||
| WBVar02121881 | |||||||||
| WBVar01727207 | |||||||||
| WBVar01649619 | |||||||||
| WBVar01649620 | |||||||||
| Strain | WBStrain00032778 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00105832 | ||||||||
| Ortholog (22) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Concise_description | clec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028945 | |||||
| WBPaper00041211 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 19 Feb 2014 00:00:00 | ||||||||
| Automated_description | Involved in PERK-mediated unfolded protein response. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56D6.2 | |||||||
| Corresponding_CDS_history | F56D6.2:wp82 | ||||||||
| Corresponding_transcript | F56D6.2.1 | ||||||||
| F56D6.2.2 | |||||||||
| Other_sequence | JI459262.1 | ||||||||
| Associated_feature | WBsf645894 | ||||||||
| WBsf228136 | |||||||||
| WBsf228137 | |||||||||
| WBsf228138 | |||||||||
| WBsf228139 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020639 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032963 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048721 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1000 | ||||||||
| Expr4512 | |||||||||
| Expr1038189 | |||||||||
| Expr1152473 | |||||||||
| Expr2010200 | |||||||||
| Expr2028441 | |||||||||
| Drives_construct | WBCnstr00012070 | ||||||||
| WBCnstr00026155 | |||||||||
| Construct_product | WBCnstr00026155 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (346) | |||||||||
| Interaction (19) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| WBbiopr:00000092 | |||||||||
| Map_info | Map | IV | Position | -1.69011 | Error | 0.017302 | |||
| Positive | Positive_clone | F56D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
