WormBase Tree Display for Gene: WBGene00018813
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| WBGene00018813 | SMap | S_parent | Sequence | F54D11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F54D11.3 | ||||||||
| Molecular_name | F54D11.3 | |||||||||
| Other_name | CELE_F54D11.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F54D11.3 | |||||||||
| DB_info | Database | AceView | gene | 5F114 | ||||||
| WormQTL | gene | WBGene00018813 | ||||||||
| WormFlux | gene | WBGene00018813 | ||||||||
| NDB | locus_tag | CELE_F54D11.3 | ||||||||
| NCBI | gene | 186237 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Nov 2018 17:09:07 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (36) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00008882 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012771 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00014130 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00021681 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| Structured_description | Automated_description | Enriched in ABarppaapp; ABarpppapp; body wall muscle cell from MS lineage; germ line; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; age-1; and rrf-3 based on microarray; RNA-seq; and tiling array studies. Is affected by eighteen chemicals including hydrogen sulfide; methylmercuric chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F54D11.3:wp107 | ||||||||
| F54D11.3:wp268 | ||||||||||
| Corresponding_pseudogene | F54D11.3 | |||||||||
| Associated_feature | WBsf668910 | |||||||||
| WBsf718295 | ||||||||||
| WBsf999841 | ||||||||||
| WBsf999842 | ||||||||||
| WBsf999843 | ||||||||||
| WBsf1019528 | ||||||||||
| WBsf1019529 | ||||||||||
| WBsf1019530 | ||||||||||
| Experimental_info | Expr_pattern | Expr1024360 | ||||||||
| Expr1152096 | ||||||||||
| Expr2004139 | ||||||||||
| Expr2022363 | ||||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (162) | ||||||||||
| Interaction | WBInteraction000299344 | |||||||||
| WBInteraction000327612 | ||||||||||
| WBInteraction000332740 | ||||||||||
| WBInteraction000343941 | ||||||||||
| WBInteraction000350688 | ||||||||||
| WBInteraction000504213 | ||||||||||
| WBInteraction000544140 | ||||||||||
| WBInteraction000548278 | ||||||||||
| Map_info | Positive | Positive_clone | F54D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -4.88252 | ||||||||
| Method | Gene |
