WormBase Tree Display for Gene: WBGene00018717
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| WBGene00018717 | SMap | S_parent | Sequence | F52H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F52H2.5 | |||||||
| Molecular_name | F52H2.5 | ||||||||
| F52H2.5.1 | |||||||||
| CE10872 | |||||||||
| F52H2.5.2 | |||||||||
| Other_name | CELE_F52H2.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F52H2.5 | ||||||||
| DB_info | Database | AceView | gene | XD176 | |||||
| WormQTL | gene | WBGene00018717 | |||||||
| WormFlux | gene | WBGene00018717 | |||||||
| NDB | locus_tag | CELE_F52H2.5 | |||||||
| NCBI | gene | 186133 | |||||||
| RefSeq | protein | NM_001392735.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317407 | |||||||
| TrEMBL | UniProtAcc | O17396 | |||||||
| UniProt_GCRP | UniProtAcc | O17396 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01601092 | ||||||||
| WBVar01127626 | |||||||||
| WBVar01127627 | |||||||||
| WBVar01127628 | |||||||||
| WBVar01127629 | |||||||||
| WBVar01127630 | |||||||||
| WBVar01127631 | |||||||||
| WBVar01127632 | |||||||||
| WBVar01127633 | |||||||||
| WBVar01127634 | |||||||||
| WBVar01127635 | |||||||||
| WBVar01127636 | |||||||||
| WBVar01127637 | |||||||||
| WBVar01127638 | |||||||||
| WBVar01127639 | |||||||||
| WBVar01127640 | |||||||||
| WBVar01127641 | |||||||||
| WBVar02151471 | |||||||||
| WBVar00076260 | |||||||||
| WBVar00076261 | |||||||||
| WBVar00076262 | |||||||||
| WBVar00076263 | |||||||||
| WBVar00497044 | |||||||||
| WBVar01499636 | |||||||||
| WBVar00497045 | |||||||||
| WBVar00497046 | |||||||||
| WBVar00497047 | |||||||||
| WBVar00497048 | |||||||||
| WBVar00264216 | |||||||||
| WBVar00264226 | |||||||||
| WBVar00264228 | |||||||||
| WBVar01954462 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Concise_description | F52H2.5 encodes a novel protein conserved amongst nematodes. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 06 Jan 2011 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including germ line; germline precursor cell; intestine; mechanosensory neurons; and rectal epithelium based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including rotenone; Alovudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52H2.5 | |||||||
| Corresponding_transcript | F52H2.5.1 | ||||||||
| F52H2.5.2 | |||||||||
| Associated_feature | WBsf653766 | ||||||||
| WBsf237094 | |||||||||
| WBsf237095 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015439 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015438 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048025 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032639 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017150 | ||||||||
| Expr1038058 | |||||||||
| Expr1151843 | |||||||||
| Expr2004012 | |||||||||
| Expr2022234 | |||||||||
| Drives_construct | WBCnstr00026319 | ||||||||
| Construct_product | WBCnstr00026319 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000328063 | ||||||||
| WBInteraction000544083 | |||||||||
| WBInteraction000546984 | |||||||||
| WBInteraction000547070 | |||||||||
| WBInteraction000547754 | |||||||||
| WBInteraction000548242 | |||||||||
| WBInteraction000548243 | |||||||||
| WBInteraction000548244 | |||||||||
| Map_info | Positive | Positive_clone | F52H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -14.3991 | |||||||
| Method | Gene |
