WormBase Tree Display for Gene: WBGene00018710
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| WBGene00018710 | SMap | S_parent | Sequence | F52G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F52G3.1 | |||||||
| Molecular_name | F52G3.1 | ||||||||
| F52G3.1.1 | |||||||||
| CE28439 | |||||||||
| Other_name | CELE_F52G3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F52G3.1 | ||||||||
| DB_info | Database | AceView | gene | XR585 | |||||
| WormQTL | gene | WBGene00018710 | |||||||
| WormFlux | gene | WBGene00018710 | |||||||
| NDB | locus_tag | CELE_F52G3.1 | |||||||
| NCBI | gene | 181741 | |||||||
| RefSeq | protein | NM_078343.10 | |||||||
| TREEFAM | TREEFAM_ID | TF328738 | |||||||
| TrEMBL | UniProtAcc | Q9GZI0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GZI0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303060 | ||||
| Split_into | WBGene00303060 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (145) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapappaa; head mesodermal cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; sek-1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including 1-methylnicotinamide; rotenone; and nicotine based on RNA-seq; proteomic; and microarray studies. Human ortholog(s) of this gene implicated in type 1 diabetes mellitus. Human PRRC2A enables RNA binding activity. Is predicted to encode a protein with the following domains: BAT2 N-terminus; BAT2, N-terminal; Phosphorylation site; and Protein PRRC2. Is an ortholog of human PRRC2A (proline rich coiled-coil 2A); PRRC2B (proline rich coiled-coil 2B); and PRRC2C (proline rich coiled-coil 2C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9744 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13918) | ||||
| Molecular_info | Corresponding_CDS | F52G3.1 | |||||||
| Corresponding_CDS_history | F52G3.1a:wp264 | ||||||||
| F52G3.1b:wp264 | |||||||||
| Corresponding_transcript | F52G3.1.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015433 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048017 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015432 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025915 | ||||||||
| Expr1038053 | |||||||||
| Expr1151834 | |||||||||
| Expr2004005 | |||||||||
| Expr2022226 | |||||||||
| Drives_construct | WBCnstr00026325 | ||||||||
| Construct_product | WBCnstr00026325 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (98) | |||||||||
| Map_info | Positive | Positive_clone | F52G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0683 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043670 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060275 | |||||||||
| Method | Gene |
