WormBase Tree Display for Gene: WBGene00018682
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| WBGene00018682 | SMap | S_parent | Sequence | F52D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | aagr-4 | Paper_evidence | WBPaper00036069 | |||||
| Person_evidence | WBPerson344 | ||||||||
| Sequence_name | F52D1.1 | ||||||||
| Molecular_name | F52D1.1 | ||||||||
| F52D1.1.1 | |||||||||
| CE38522 | |||||||||
| Other_name | CELE_F52D1.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | aagr-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Apr 2010 14:03:06 | WBPerson2970 | Name_change | CGC_name | aagr-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aagr | ||||||||
| Allele (83) | |||||||||
| Strain | WBStrain00032006 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029649 | ||||||||
| 00029650 | |||||||||
| 00029651 | |||||||||
| 00029652 | |||||||||
| 00029653 | |||||||||
| 00029654 | |||||||||
| 00123741 | |||||||||
| 00123742 | |||||||||
| 00123743 | |||||||||
| 00123744 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00009583 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017071 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019895 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable alpha-glucosidase activity. Predicted to be involved in N-glycan processing. Human ortholog(s) of this gene implicated in polycystic kidney disease 3 and polycystic liver disease. Is an ortholog of human GANAB (glucosidase II alpha subunit) and GANC (glucosidase alpha, neutral C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080322 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||
| DOID:0110860 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||||
| DOID:0050770 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||||
| Molecular_info | Corresponding_CDS | F52D1.1 | |||||||
| Corresponding_CDS_history | F52D1.1:wp133 | ||||||||
| F52D1.1:wp142 | |||||||||
| Corresponding_transcript | F52D1.1.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076459 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047958 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023843 | ||||||||
| Expr1038043 | |||||||||
| Expr1151777 | |||||||||
| Expr2009051 | |||||||||
| Expr2027287 | |||||||||
| Drives_construct | WBCnstr00026343 | ||||||||
| Construct_product | WBCnstr00026343 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (252) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | X | Position | -19.8285 | Error | 0.029833 | |||
| Positive | Positive_clone | F52D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036069 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064403 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
