WormBase Tree Display for Gene: WBGene00017071
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| WBGene00017071 | SMap | S_parent | Sequence | D2096 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | aagr-1 | Paper_evidence | WBPaper00036069 | |||||
| Person_evidence | WBPerson344 | ||||||||
| Sequence_name | D2096.3 | ||||||||
| Molecular_name | D2096.3 | ||||||||
| D2096.3.1 | |||||||||
| CE33610 | |||||||||
| D2096.3.2 | |||||||||
| Other_name | CELE_D2096.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | aagr-1 | ||||||||
| DB_info | Database | AceView | gene | 4J139 | |||||
| WormQTL | gene | WBGene00017071 | |||||||
| WormFlux | gene | WBGene00017071 | |||||||
| NDB | locus_tag | CELE_D2096.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017071|UniProtKB=Q19004 | |||||||
| family | PTHR22762 | ||||||||
| NCBI | gene | 177632 | |||||||
| RefSeq | protein | NM_069018.8 | |||||||
| TREEFAM | TREEFAM_ID | TF314577 | |||||||
| TrEMBL | UniProtAcc | Q19004 | |||||||
| UniProt_GCRP | UniProtAcc | Q19004 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Apr 2010 14:03:05 | WBPerson2970 | Name_change | CGC_name | aagr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aagr | ||||||||
| Allele (117) | |||||||||
| Strain | WBStrain00032002 | ||||||||
| WBStrain00032481 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (56) | |||||||||
| Paralog | WBGene00009583 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00019895 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018682 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables alpha-1,4-glucosidase activity. Involved in glycogen catabolic process. Predicted to be located in lysosome. Is an ortholog of human MGAM (maltase-glucoamylase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2096.3 | |||||||
| Corresponding_CDS_history | D2096.3:wp96 | ||||||||
| Corresponding_transcript | D2096.3.1 | ||||||||
| D2096.3.2 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf660398 | ||||||||
| WBsf660399 | |||||||||
| WBsf997200 | |||||||||
| WBsf997201 | |||||||||
| WBsf1017832 | |||||||||
| Experimental_info | Expr_pattern | Expr1023491 | |||||||
| Expr1147522 | |||||||||
| Expr2009048 | |||||||||
| Expr2027284 | |||||||||
| Drives_construct | WBCnstr00027591 | ||||||||
| Construct_product | WBCnstr00027591 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (261) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | IV | Position | 3.7234 | Error | 0.003968 | |||
| Positive | Positive_clone | D2096 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036069 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058665 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
